Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g02590.t01 | Wine grape | endoplasmic reticulum | 33.88 | 34.44 |
| KRH50574 | Soybean | plastid | 28.96 | 32.32 |
| KRH70747 | Soybean | cytosol | 25.68 | 31.33 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.23 | 30.77 |
| Os11t0600500-00 | Rice | endoplasmic reticulum | 30.6 | 29.32 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 30.05 | 28.8 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 20.77 | 28.36 |
| Zm00001d048913_P001 | Maize | plastid | 30.05 | 27.36 |
| KRH74886 | Soybean | extracellular, golgi | 27.32 | 26.74 |
| EES10045 | Sorghum | endoplasmic reticulum, plasma membrane | 28.42 | 26.53 |
| TraesCS1A01G394100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, plastid | 26.78 | 26.49 |
| TraesCS1B01G422600.1 | Wheat | plastid | 26.78 | 26.49 |
| TraesCS1D01G402400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 26.23 | 25.95 |
| HORVU1Hr1G086900.1 | Barley | endoplasmic reticulum, vacuole | 27.32 | 25.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.31 | 23.64 |
| Os09t0412300-01 | Rice | plastid | 6.01 | 11.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P14950_001 | EnsemblPlants:GSMUA_Achr2T14950_001 | EnsemblPlantsGene:GSMUA_Achr2G14950_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR45512 |
| PANTHER:PTHR45512:SF1 | PFAM:PF13833 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002951A34 | UniProt:M0S836 | MapMan:35.1 | : | : | : |
Description
Putative Probable calcium-binding protein CML45 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14950_001]
Coordinates
chr2:+:16492793..16493594
Molecular Weight (calculated)
20878.2 Da
IEP (calculated)
4.125
GRAVY (calculated)
0.044
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKFVSLAEP LEVLLLHTVL HWFAMMLERL SLGFMSFLHS YFQFCTCLSM AKDEQLMHSS SRQPREDQCL SRKEVEMVMD KMGICCPFEG EQLCEHMSSD
101: EISGLFEENE PSLEEVKAAF CFFDANNDGF IDAVELQTAL LKLGITEGLE LDACRTMIAI YDGNYDGKIG FDEFVKLMET SLC
101: EISGLFEENE PSLEEVKAAF CFFDANNDGF IDAVELQTAL LKLGITEGLE LDACRTMIAI YDGNYDGKIG FDEFVKLMET SLC
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.