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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • golgi 4
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048913_P001 Maize plastid 48.98 47.76
Os11t0600500-00 Rice endoplasmic reticulum 39.29 40.31
TraesCS1B01G422600.1 Wheat plastid 35.71 37.84
TraesCS1A01G394100.1 Wheat cytosol, endoplasmic reticulum, extracellular, plastid 34.18 36.22
TraesCS1D01G402400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 34.18 36.22
HORVU1Hr1G086900.1 Barley endoplasmic reticulum, vacuole 34.69 34.52
KRH70747 Soybean cytosol 23.47 30.67
GSMUA_Achr2P14950_001 Banana endoplasmic reticulum 26.53 28.42
KRH50574 Soybean plastid 23.47 28.05
VIT_01s0026g02590.t01 Wine grape endoplasmic reticulum 25.51 27.78
EER98893 Sorghum plastid 24.49 25.4
KRH74886 Soybean extracellular, golgi 23.47 24.6
KRG89588 Soybean endoplasmic reticulum, golgi 23.47 24.08
OQU88717 Sorghum cytosol 17.86 19.02
OQU90756 Sorghum endoplasmic reticulum, vacuole 18.88 16.3
Protein Annotations
Gene3D:1.10.238.10MapMan:35.1EntrezGene:8066681UniProt:C5Y5T2EnsemblPlants:EES10045ProteinID:EES10045
ProteinID:EES10045.1InterPro:EF-hand-dom_pairInterPro:EF_Hand_1_Ca_BSInterPro:EF_hand_domGO:GO:0003674GO:GO:0005488
GO:GO:0005509InterPro:IPR002048PFAM:PF13499ScanProsite:PS00018PFscan:PS50222PANTHER:PTHR45512
SMART:SM00054EnsemblPlantsGene:SORBI_3005G175800SUPFAM:SSF47473UniParc:UPI0001A86A18RefSeq:XP_002451057.1SEG:seg
Description
hypothetical protein
Coordinates
chr5:-:65756374..65757481
Molecular Weight (calculated)
22072.3 Da
IEP (calculated)
4.461
GRAVY (calculated)
-0.215
Length
196 amino acids
Sequence
(BLAST)
001: MENSSCAAAC HFLVLQEACV INLFLKFLTC WSVSVFQIHL PCSCKCCNCN HSSSEKVTQT PVITTDKEVI ERRKKDQDNK TALTQEDIKT VMISIGFNLD
101: QENSMAIGNV SIPRIFDDDE PSLQEVREAF LVFDHNNDGY FDASDLQRVL KSLGLGEGVG MDDCEQMIAK YDMNKDRRID VSEFTKVLES GINLLN
Best Arabidopsis Sequence Match ( AT5G39670.1 )
(BLAST)
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.