Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01190 | Soybean | cytosol, nucleus, vacuole | 89.86 | 89.86 |
| KRH16684 | Soybean | cytosol | 71.01 | 76.17 |
| CDX74438 | Canola | cytosol | 34.78 | 67.29 |
| CDY30262 | Canola | cytosol | 34.78 | 67.29 |
| Bra039037.1-P | Field mustard | cytosol | 33.82 | 66.67 |
| CDY20005 | Canola | cytosol | 33.82 | 66.67 |
| CDX85236 | Canola | endoplasmic reticulum, extracellular | 43.96 | 48.4 |
| CDY37011 | Canola | plastid | 43.0 | 46.11 |
| Bra028438.1-P | Field mustard | plastid | 43.48 | 45.92 |
| Bra025654.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 41.55 | 45.74 |
| CDY66024 | Canola | endoplasmic reticulum, extracellular | 40.58 | 45.65 |
| CDX67435 | Canola | plastid | 43.0 | 45.41 |
| VIT_14s0108g01000.t01 | Wine grape | cytosol | 33.82 | 44.87 |
| Bra030349.1-P | Field mustard | endoplasmic reticulum, plastid | 39.13 | 43.78 |
| CDX74439 | Canola | endoplasmic reticulum, extracellular, plastid, vacuole | 42.03 | 43.72 |
| AT5G39670.1 | Thale cress | plastid | 43.0 | 43.63 |
| Bra033077.1-P | Field mustard | cytosol, endoplasmic reticulum, mitochondrion, plastid | 39.13 | 43.55 |
| CDY15945 | Canola | plastid | 41.06 | 43.37 |
| CDY44416 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 39.13 | 43.32 |
| AT3G29000.1 | Thale cress | endoplasmic reticulum | 40.58 | 43.3 |
| CDX99659 | Canola | extracellular | 35.27 | 41.24 |
| Solyc02g067220.2.1 | Tomato | extracellular | 26.57 | 39.29 |
| KRH50574 | Soybean | plastid | 29.95 | 37.8 |
| Solyc02g088090.1.1 | Tomato | extracellular, golgi | 32.37 | 37.02 |
| PGSC0003DMT400064699 | Potato | golgi | 34.3 | 36.79 |
| PGSC0003DMT400003364 | Potato | endoplasmic reticulum, golgi | 32.37 | 35.83 |
| KRH70747 | Soybean | cytosol | 25.6 | 35.33 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.15 | 32.05 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 29.47 | 31.94 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 20.29 | 31.34 |
| Zm00001d005766_P001 | Maize | plastid | 26.57 | 30.56 |
| KRH74886 | Soybean | extracellular, golgi | 26.09 | 28.88 |
| EER98893 | Sorghum | plastid | 25.12 | 27.51 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 23.19 | 27.43 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 24.64 | 27.42 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 24.15 | 26.88 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 24.15 | 26.88 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 24.15 | 26.88 |
| OQU88717 | Sorghum | cytosol | 23.67 | 26.63 |
| HORVU5Hr1G066260.1 | Barley | plastid | 22.71 | 25.82 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 23.19 | 25.81 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 23.67 | 25.39 |
| TraesCS5D01G238700.1 | Wheat | plastid | 21.26 | 25.29 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 25.6 | 24.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.81 | 24.85 |
| Os12t0140050-00 | Rice | cytosol | 17.87 | 24.5 |
| TraesCS5A01G229000.1 | Wheat | plastid | 20.77 | 24.16 |
| Zm00001d013004_P001 | Maize | vacuole | 22.71 | 21.46 |
| TraesCS5B01G227700.1 | Wheat | plastid | 21.74 | 19.74 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 20.29 | 18.5 |
| Os03t0812800-00 | Rice | extracellular | 18.84 | 18.14 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 17.39 | 18.09 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 16.91 | 17.59 |
| HORVU5Hr1G111520.1 | Barley | plastid | 17.39 | 17.48 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 16.91 | 17.24 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100791756 | MapMan:35.1 | EMBL:ACUP02006017 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_09G236800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | UniProt:I1L5W4 |
| InterPro:IPR002048 | EnsemblPlants:KRH40081 | ProteinID:KRH40081 | ProteinID:KRH40081.1 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR45512 | PANTHER:PTHR45512:SF1 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0002338494 |
Description
hypothetical protein
Coordinates
chr9:-:45898413..45899662
Molecular Weight (calculated)
24062.4 Da
IEP (calculated)
4.154
GRAVY (calculated)
-0.358
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVILREIDFL ISEGKASQND GNSTSPLLGL VDLSLYYTCF YKLQSFFVSF WVFLLCQLFS NDSRVRGEEQ VSKPEEFSHQ ENESKRSLDS ENYLETDEVT
101: MVMAKLGFFC SSESEELQEK YGSKELSKLF EEQEPSLEEV KQAFDVFDEN KDGFIDAKEL QRVLCILGLK EAAELENCNK MIRIFDTNQD GRIDFIEFVK
201: IMENRFC
101: MVMAKLGFFC SSESEELQEK YGSKELSKLF EEQEPSLEEV KQAFDVFDEN KDGFIDAKEL QRVLCILGLK EAAELENCNK MIRIFDTNQD GRIDFIEFVK
201: IMENRFC
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.