Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- cytosol 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40081 | Soybean | cytosol | 89.86 | 89.86 |
| KRH16684 | Soybean | cytosol | 77.29 | 82.9 |
| CDX74438 | Canola | cytosol | 34.3 | 66.36 |
| CDY30262 | Canola | cytosol | 34.3 | 66.36 |
| Bra039037.1-P | Field mustard | cytosol | 33.33 | 65.71 |
| CDY20005 | Canola | cytosol | 33.33 | 65.71 |
| CDX85236 | Canola | endoplasmic reticulum, extracellular | 43.48 | 47.87 |
| Bra028438.1-P | Field mustard | plastid | 43.96 | 46.43 |
| CDY37011 | Canola | plastid | 43.0 | 46.11 |
| CDX67435 | Canola | plastid | 43.48 | 45.92 |
| Bra025654.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 41.55 | 45.74 |
| CDY66024 | Canola | endoplasmic reticulum, extracellular | 40.58 | 45.65 |
| VIT_14s0108g01000.t01 | Wine grape | cytosol | 33.82 | 44.87 |
| Bra030349.1-P | Field mustard | endoplasmic reticulum, plastid | 39.61 | 44.32 |
| CDX74439 | Canola | endoplasmic reticulum, extracellular, plastid, vacuole | 42.51 | 44.22 |
| AT5G39670.1 | Thale cress | plastid | 43.48 | 44.12 |
| AT3G29000.1 | Thale cress | endoplasmic reticulum | 41.06 | 43.81 |
| CDY15945 | Canola | plastid | 41.06 | 43.37 |
| Bra033077.1-P | Field mustard | cytosol, endoplasmic reticulum, mitochondrion, plastid | 38.65 | 43.01 |
| CDY44416 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 38.65 | 42.78 |
| CDX99659 | Canola | extracellular | 34.78 | 40.68 |
| Solyc02g067220.2.1 | Tomato | extracellular | 25.6 | 37.86 |
| KRH50574 | Soybean | plastid | 29.95 | 37.8 |
| Solyc02g088090.1.1 | Tomato | extracellular, golgi | 32.85 | 37.57 |
| PGSC0003DMT400064699 | Potato | golgi | 33.82 | 36.27 |
| KRH70747 | Soybean | cytosol | 26.09 | 36.0 |
| PGSC0003DMT400003364 | Potato | endoplasmic reticulum, golgi | 32.37 | 35.83 |
| KRG89588 | Soybean | endoplasmic reticulum, golgi | 28.99 | 31.41 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.67 | 31.41 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 20.29 | 31.34 |
| Zm00001d005766_P001 | Maize | plastid | 26.09 | 30.0 |
| KRH74886 | Soybean | extracellular, golgi | 26.57 | 29.41 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 24.15 | 26.88 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 22.71 | 26.86 |
| EER98893 | Sorghum | plastid | 24.15 | 26.45 |
| HORVU5Hr1G066260.1 | Barley | plastid | 23.19 | 26.37 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 23.19 | 25.81 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 23.19 | 25.81 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 23.19 | 25.81 |
| TraesCS5D01G238700.1 | Wheat | plastid | 21.26 | 25.29 |
| Os12t0140050-00 | Rice | cytosol | 18.36 | 25.17 |
| OQU88717 | Sorghum | cytosol | 22.22 | 25.0 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 23.19 | 24.87 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 22.22 | 24.73 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 25.12 | 24.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.32 | 24.24 |
| TraesCS5A01G229000.1 | Wheat | plastid | 20.77 | 24.16 |
| Zm00001d013004_P001 | Maize | vacuole | 22.22 | 21.0 |
| TraesCS5B01G227700.1 | Wheat | plastid | 21.26 | 19.3 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 17.87 | 18.59 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 17.87 | 18.59 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 20.29 | 18.5 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 17.87 | 18.23 |
| Os03t0812800-00 | Rice | extracellular | 18.84 | 18.14 |
| HORVU5Hr1G111520.1 | Barley | plastid | 17.39 | 17.48 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100791253 | MapMan:35.1 | EMBL:ACUP02011507 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | EnsemblPlantsGene:GLYMA_18G260700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | UniProt:I1N4E7 |
| InterPro:IPR002048 | EnsemblPlants:KRH01190 | ProteinID:KRH01190 | ProteinID:KRH01190.1 | PFAM:PF13499 | ScanProsite:PS00018 |
| PFscan:PS50222 | PANTHER:PTHR45512 | PANTHER:PTHR45512:SF1 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI00023D961D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:54660451..54661757
Molecular Weight (calculated)
24088.4 Da
IEP (calculated)
4.222
GRAVY (calculated)
-0.411
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVILREIGYL ISDGKASQND GNSTSPLFGL VDLSLYYTCF YNLQSFFLSF WCFLLYQLFP NDSKVRAEEQ VSKPGEFSHQ ENESKGSIDS ENYLERDEVK
101: MVMAKLGFFC SSESEELQEK YGSKELSELF EEQEPSLEEV KQAFDVFDEN KDGFIDAEEL QRVLCILGLK EAAKLENCHK MIRIFDTNQD GRIDFIEFVK
201: IMENRFR
101: MVMAKLGFFC SSESEELQEK YGSKELSELF EEQEPSLEEV KQAFDVFDEN KDGFIDAEEL QRVLCILGLK EAAKLENCHK MIRIFDTNQD GRIDFIEFVK
201: IMENRFR
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.