Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 96.24 | 96.24 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 83.87 | 89.14 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 80.11 | 80.11 |
| OQU88717 | Sorghum | cytosol | 45.7 | 46.2 |
| Bra000299.1-P | Field mustard | cytosol | 16.67 | 43.06 |
| CDY28045 | Canola | cytosol | 18.28 | 40.48 |
| Bra032444.1-P | Field mustard | cytosol | 15.59 | 40.28 |
| CDY06192 | Canola | cytosol | 15.59 | 40.28 |
| CDY09997 | Canola | cytosol | 15.59 | 40.28 |
| Bra030632.1-P | Field mustard | cytosol | 17.2 | 39.02 |
| CDY35936 | Canola | cytosol | 17.2 | 38.1 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 27.42 | 38.06 |
| PGSC0003DMT400086481 | Potato | cytosol | 15.59 | 32.58 |
| CDY09996 | Canola | cytosol | 15.05 | 30.77 |
| VIT_14s0108g01000.t01 | Wine grape | cytosol | 25.27 | 30.13 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 32.8 | 30.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.34 | 29.7 |
| Solyc12g009630.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 23.12 | 27.56 |
| KRH40081 | Soybean | cytosol | 27.42 | 24.64 |
| KRH01190 | Soybean | cytosol, nucleus, vacuole | 26.88 | 24.15 |
| AT3G29000.1 | Thale cress | endoplasmic reticulum | 24.73 | 23.71 |
| KRH16684 | Soybean | cytosol | 22.04 | 21.24 |
| AT5G39670.1 | Thale cress | plastid | 22.58 | 20.59 |
| TraesCS5B01G227700.1 | Wheat | plastid | 24.19 | 19.74 |
| TraesCS1B01G422600.1 | Wheat | plastid | 18.28 | 18.38 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G471000.1 | EnsemblPlantsGene:TraesCS1B01G471000 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR45512 | PFAM:PF13499 |
| PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 | TMHMM:TMhelix |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:679249861..679250421
Molecular Weight (calculated)
21046.7 Da
IEP (calculated)
4.264
GRAVY (calculated)
0.119
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MWAMVMMDQN VLIALVSYLL MLILGPLIID VILVSKKIWS FLHTFTKYLA HDDTLVVDSM VLDDSPTSPA KVTGGGGLTS RDIEIVTARL GLTGWRYQGC
101: EGISVLDELM DGKQASKGEL EEAFCVFDRD EDGFICAGEL WNVMRRLGWK EGAMYEDCVR MIRPFDEDED GKISFLEFRR MMENAI
101: EGISVLDELM DGKQASKGEL EEAFCVFDRD EDGFICAGEL WNVMRRLGWK EGAMYEDCVR MIRPFDEDED GKISFLEFRR MMENAI
001: MESKSSSSSL PLFALFNFFL ISFCRWVSST RIFLSRFVPL LQHHQRVFDK KNNKDQQETL TKQEDDDDDD DDDDDDDDDD IDISREEAEM VMRSLGLFYN
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
Arabidopsis Description
CML45Probable calcium-binding protein CML30 [Source:UniProtKB/Swiss-Prot;Acc:Q9MBG5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.