Factsheet for Bra030632.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032444.1-P	Field mustard	cytosol	84.15	95.83
CDY09997	Canola	cytosol	81.71	93.06
Bra000299.1-P	Field mustard	cytosol	71.95	81.94
PGSC0003DMT400086481	Potato	cytosol	46.34	42.7
Bra039037.1-P	Field mustard	cytosol	41.46	32.38
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	53.66	28.21
GSMUA_Achr7P21710_001	Banana	cytosol	40.24	24.63
GSMUA_Achr9P17010_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.46	21.79
GSMUA_AchrUn_...	Banana	cytosol	40.24	20.0
EER98893	Sorghum	plastid	45.12	19.58
Os12t0140050-00	Rice	cytosol	35.37	19.21
TraesCS5D01G238700.1	Wheat	plastid	40.24	18.97
Bra030349.1-P	Field mustard	endoplasmic reticulum, plastid	42.68	18.92
Zm00001d005766_P001	Maize	plastid	41.46	18.89
TraesCS1A01G435100.1	Wheat	extracellular	40.24	18.86
TraesCS1A01G435200.1	Wheat	endoplasmic reticulum, extracellular	42.68	18.82
TraesCS1B01G470900.1	Wheat	endoplasmic reticulum, golgi	42.68	18.82
TraesCS1D01G444200.1	Wheat	endoplasmic reticulum, golgi	43.9	18.65
Bra025654.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.68	18.62
TraesCS5A01G229000.1	Wheat	plastid	40.24	18.54
HORVU5Hr1G066260.1	Barley	plastid	40.24	18.13
OQU88717	Sorghum	cytosol	40.24	17.93
Bra028438.1-P	Field mustard	plastid	41.46	17.35
HORVU1Hr1G094230.1	Barley	extracellular, golgi	39.02	17.2
HORVU1Hr1G094160.1	Barley	extracellular	39.02	17.2
Bra033077.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	39.02	17.2
TraesCS1B01G471000.1	Wheat	endoplasmic reticulum, golgi	39.02	17.2
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	39.02	15.02
Zm00001d013004_P001	Maize	vacuole	39.02	14.61
OQU90756	Sorghum	endoplasmic reticulum, vacuole	40.24	14.54
Os03t0812800-00	Rice	extracellular	36.59	13.95
TraesCS5B01G227700.1	Wheat	plastid	37.8	13.6
HORVU5Hr1G111520.1	Barley	plastid	34.15	13.59
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	32.93	13.57
TraesCS5D01G481000.1	Wheat	extracellular, plastid	32.93	13.57
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	32.93	13.3

Protein Annotations

EnsemblPlants:Bra030632.1	EnsemblPlants:Bra030632.1-P	EnsemblPlantsGene:Bra030632	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF546	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI000254711E	UniProt:M4EPB2	MapMan:35.1	:	:

Description

AT1G05990 (E=1e-033) | calcium-binding protein, putative

Coordinates

chrA08:-:20998764..20999012

Molecular Weight (calculated)

9073.7 Da

IEP (calculated)

4.075

GRAVY (calculated)

-0.621

Length

82 amino acids

Sequence
(BLAST)

1: MEGEEEEEED MKEAFNVFDQ NGDGFITVDE LKAVLSSLGL KQGKTLDDCK KMIMQVDGDG DGRVNFKEFR QMMKGGGFSA LG

Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)

001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL

Arabidopsis Description

CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.