Factsheet for HORVU5Hr1G111520.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G39670.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G39670.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT5G39670.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT5G39670.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT5G39670.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT5G39670.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT5G39670.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT5G39670.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G481000.1	Wheat	extracellular, plastid	75.24	77.89
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	76.7	77.83
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	72.82	75.38
Os03t0812800-00	Rice	extracellular	43.69	41.86
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	42.72	41.31
Zm00001d013004_P001	Maize	vacuole	42.23	39.73
OQU90756	Sorghum	endoplasmic reticulum, vacuole	39.81	36.12
HORVU1Hr1G094160.1	Barley	extracellular	32.52	36.02
HORVU1Hr1G094230.1	Barley	extracellular, golgi	31.55	34.95
Bra000299.1-P	Field mustard	cytosol	12.14	34.72
Bra032444.1-P	Field mustard	cytosol	12.14	34.72
CDY06192	Canola	cytosol	12.14	34.72
CDY09997	Canola	cytosol	12.14	34.72
Bra030632.1-P	Field mustard	cytosol	13.59	34.15
CDY35936	Canola	cytosol	13.59	33.33
CDY28045	Canola	cytosol	13.59	33.33
GSMUA_Achr7P21710_001	Banana	cytosol	19.9	30.6
PGSC0003DMT400086481	Potato	cytosol	12.62	29.21
CDY09996	Canola	cytosol	11.65	26.37
GSMUA_AchrUn_...	Banana	cytosol	19.9	24.85
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	18.45	24.36
VIT_14s0108g01000.t01	Wine grape	cytosol	17.96	23.72
AT3G29000.1	Thale cress	endoplasmic reticulum	20.87	22.16
HORVU5Hr1G066260.1	Barley	plastid	18.45	20.88
AT5G39670.1	Thale cress	plastid	17.96	18.14
KRH40081	Soybean	cytosol	17.48	17.39
KRH01190	Soybean	cytosol, nucleus, vacuole	17.48	17.39
HORVU1Hr1G086900.1	Barley	endoplasmic reticulum, vacuole	15.05	15.74
KRH16684	Soybean	cytosol	13.11	13.99

Protein Annotations

EnsemblPlants:HORVU5Hr1G111520.1	EnsemblPlantsGene:HORVU5Hr1G111520	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR45003	PFAM:PF13405
PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SMART:SM00054	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI00029519AA	UniProt:M0YKL5	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:636573063..636574412

Molecular Weight (calculated)

21178.9 Da

IEP (calculated)

4.257

GRAVY (calculated)

0.089

Length

206 amino acids

Sequence
(BLAST)

001: MCQAARAYHN NGLIASVSSL LISLVMKPLA KSAILTGRSI LALVAGDGDS SSVVAVADAP RGRHCDRCAA CEDGARLSGS DAAAVMASLG LVVSHGDDDD
101: DDDDGMVECG GCEAMSVVEE VAWGSKEAGE AELREAFGLF DRDGDGLVSA AELWGVLRRL GMAEGTRYED CARMVAAAAA RHGDATGGVD AGLGFPEFRA
201: MMEHAV

Best Arabidopsis Sequence Match ( AT5G44460.1 )
(BLAST)

001: MEINNEKKKL SRQSSSFRLR SPSLNALRLH RVFDLFDKNN DGFITVEELS QALSRLGLDA DFSDLKSTVD SFIKPDKTGL RFDDFAALHK TLDESFFGGE
101: GSCCDGSPES DLEEAFNVFD EDGDGFISAV ELQKVLKKLG LPEAGEIEQV EKMIVSVDSN HDGRVDFFEF KNMMQTVVVP S

Arabidopsis Description

CML43Probable calcium-binding protein CML43 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.