Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74438 | Canola | cytosol | 45.59 | 86.92 |
| CDY30262 | Canola | cytosol | 45.59 | 86.92 |
| Bra025654.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 70.59 | 76.6 |
| Bra030349.1-P | Field mustard | endoplasmic reticulum, plastid | 64.71 | 71.35 |
| Bra028438.1-P | Field mustard | plastid | 68.14 | 70.92 |
| CDX67435 | Canola | plastid | 68.14 | 70.92 |
| CDX99659 | Canola | extracellular | 61.27 | 70.62 |
| CDY15945 | Canola | plastid | 67.16 | 69.9 |
| CDY37011 | Canola | plastid | 65.69 | 69.43 |
| CDX74439 | Canola | endoplasmic reticulum, extracellular, plastid, vacuole | 66.67 | 68.34 |
| AT3G29000.1 | Thale cress | endoplasmic reticulum | 52.94 | 55.67 |
| VIT_14s0108g01000.t01 | Wine grape | cytosol | 33.82 | 44.23 |
| KRH01190 | Soybean | cytosol, nucleus, vacuole | 44.12 | 43.48 |
| KRH40081 | Soybean | cytosol | 43.63 | 43.0 |
| KRH16684 | Soybean | cytosol | 35.78 | 37.82 |
| Solyc02g067220.2.1 | Tomato | extracellular | 24.51 | 35.71 |
| PGSC0003DMT400003364 | Potato | endoplasmic reticulum, golgi | 31.86 | 34.76 |
| Solyc02g088090.1.1 | Tomato | extracellular, golgi | 30.39 | 34.25 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 21.08 | 32.09 |
| PGSC0003DMT400064699 | Potato | golgi | 29.9 | 31.61 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.04 | 30.13 |
| Zm00001d005766_P001 | Maize | plastid | 25.98 | 29.44 |
| Os12t0140050-00 | Rice | cytosol | 20.59 | 27.81 |
| TraesCS5D01G238700.1 | Wheat | plastid | 23.04 | 27.01 |
| HORVU5Hr1G066260.1 | Barley | plastid | 24.02 | 26.92 |
| EER98893 | Sorghum | plastid | 24.51 | 26.45 |
| OQU88717 | Sorghum | cytosol | 23.53 | 26.09 |
| TraesCS5A01G229000.1 | Wheat | plastid | 22.55 | 25.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.1 | 24.85 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 22.06 | 24.19 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 22.06 | 24.19 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 20.1 | 23.43 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 22.06 | 23.32 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 20.59 | 22.58 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 20.59 | 22.58 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 20.1 | 22.04 |
| Zm00001d013004_P001 | Maize | vacuole | 23.53 | 21.92 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 22.55 | 21.6 |
| TraesCS5B01G227700.1 | Wheat | plastid | 22.55 | 20.18 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 19.61 | 19.7 |
| Os03t0812800-00 | Rice | extracellular | 20.1 | 19.07 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 21.08 | 18.94 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 18.14 | 18.59 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 18.14 | 18.59 |
| HORVU5Hr1G111520.1 | Barley | plastid | 18.14 | 17.96 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | EntrezGene:833963 | UniProt:A0A178UPR1 | ProteinID:AED94462.1 | ArrayExpress:AT5G39670 |
| EnsemblPlantsGene:AT5G39670 | RefSeq:AT5G39670 | TAIR:AT5G39670 | RefSeq:AT5G39670-TAIR-G | EnsemblPlants:AT5G39670.1 | TAIR:AT5G39670.1 |
| EMBL:AY058192 | EMBL:AY098977 | Unigene:At.19755 | ProteinID:BAB08899.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS |
| InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | InterPro:IPR002048 | RefSeq:NP_568568.1 | ProteinID:OAO95337.1 |
| PFAM:PF13499 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR45512 | PANTHER:PTHR45512:SF1 | UniProt:Q93Z27 | SMART:SM00054 |
| SUPFAM:SSF47473 | TMHMM:TMhelix | UniParc:UPI000009DDA0 | SEG:seg | : | : |
Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
Coordinates
chr5:+:15883179..15884067
Molecular Weight (calculated)
23835.2 Da
IEP (calculated)
4.668
GRAVY (calculated)
-0.475
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.