Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER98893 | Sorghum | plastid | 62.22 | 59.26 |
| TraesCS5D01G238700.1 | Wheat | plastid | 54.44 | 56.32 |
| TraesCS5A01G229000.1 | Wheat | plastid | 53.33 | 53.93 |
| HORVU5Hr1G066260.1 | Barley | plastid | 52.22 | 51.65 |
| Bra030632.1-P | Field mustard | cytosol | 18.89 | 41.46 |
| Bra032444.1-P | Field mustard | cytosol | 16.11 | 40.28 |
| CDY06192 | Canola | cytosol | 16.11 | 40.28 |
| CDY09997 | Canola | cytosol | 16.11 | 40.28 |
| TraesCS5B01G227700.1 | Wheat | plastid | 50.56 | 39.91 |
| Bra000299.1-P | Field mustard | cytosol | 15.56 | 38.89 |
| CDY28045 | Canola | cytosol | 16.67 | 35.71 |
| CDY35936 | Canola | cytosol | 16.67 | 35.71 |
| PGSC0003DMT400086481 | Potato | cytosol | 16.67 | 33.71 |
| VIT_14s0108g01000.t01 | Wine grape | cytosol | 27.22 | 31.41 |
| CDY09996 | Canola | cytosol | 15.56 | 30.77 |
| AT3G29000.1 | Thale cress | endoplasmic reticulum | 31.67 | 29.38 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.0 | 28.85 |
| KRH40081 | Soybean | cytosol | 30.56 | 26.57 |
| Zm00001d013004_P001 | Maize | vacuole | 32.22 | 26.48 |
| KRH01190 | Soybean | cytosol, nucleus, vacuole | 30.0 | 26.09 |
| AT5G39670.1 | Thale cress | plastid | 29.44 | 25.98 |
| Solyc12g009630.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 22.22 | 25.64 |
| KRH16684 | Soybean | cytosol | 26.11 | 24.35 |
| Zm00001d048913_P001 | Maize | plastid | 22.78 | 20.4 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:100284831 | MapMan:35.2 | UniProt:B6TXW9 | ncoils:Coil | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | EMBL:EU969834 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR002048 | ProteinID:ONM21856.1 | PFAM:PF13499 |
| ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR45512 | SMART:SM00054 | SUPFAM:SSF47473 | TMHMM:TMhelix |
| UniParc:UPI000182E50C | EnsemblPlantsGene:Zm00001d005766 | EnsemblPlants:Zm00001d005766_P001 | EnsemblPlants:Zm00001d005766_T001 | SEG:seg | : |
Description
Calmodulin-like protein
Coordinates
chr2:+:187317766..187318308
Molecular Weight (calculated)
18756.8 Da
IEP (calculated)
4.004
GRAVY (calculated)
0.047
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMASSSAPT ASYNVSVAQA VLTLSINAIL LWLTTVIKSY SSSSSSARRR DAAPATAPAP PSPSPAKPAA AAAAAVDLDA VLGLMGAGAE SVGFEEAAAL
101: FEEEEATVEE ARQAFAVFDR DGDGFIDAAE LRAVLTSLGF ESGVSAAAEA ECQRMIDAYD EDKDGRIDFR EFVKLMETSH
101: FEEEEATVEE ARQAFAVFDR DGDGFIDAAE LRAVLTSLGF ESGVSAAAEA ECQRMIDAYD EDKDGRIDFR EFVKLMETSH
001: MESKSSSSSL PLFALFNFFL ISFCRWVSST RIFLSRFVPL LQHHQRVFDK KNNKDQQETL TKQEDDDDDD DDDDDDDDDD IDISREEAEM VMRSLGLFYN
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
101: DDQLQEQYSA KEVSSLFEEK EASLEEVKQA FDVFDENKDG FIDAIELQRV LTILGFKQGS YLDNCLVMIR SLDGNKDGKI DFNEFVKFME TSFY
Arabidopsis Description
CML45Probable calcium-binding protein CML30 [Source:UniProtKB/Swiss-Prot;Acc:Q9MBG5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.