Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032444.1-P | Field mustard | cytosol | 26.28 | 56.94 |
| CDY06192 | Canola | cytosol | 26.28 | 56.94 |
| CDY09997 | Canola | cytosol | 26.28 | 56.94 |
| Bra000299.1-P | Field mustard | cytosol | 25.64 | 55.56 |
| Bra030632.1-P | Field mustard | cytosol | 28.21 | 53.66 |
| CDY28045 | Canola | cytosol | 28.21 | 52.38 |
| CDY35936 | Canola | cytosol | 28.21 | 52.38 |
| CDY09996 | Canola | cytosol | 26.28 | 45.05 |
| PGSC0003DMT400086481 | Potato | cytosol | 21.15 | 37.08 |
| Solyc02g067220.2.1 | Tomato | extracellular | 25.0 | 27.86 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 23.08 | 26.87 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.28 | 26.28 |
| Solyc02g088090.1.1 | Tomato | extracellular, golgi | 29.49 | 25.41 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 29.49 | 24.73 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 27.56 | 24.57 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 28.85 | 24.19 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 28.85 | 23.32 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 27.56 | 23.12 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 27.56 | 23.12 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 26.92 | 22.58 |
| Zm00001d005766_P001 | Maize | plastid | 25.64 | 22.22 |
| Os12t0140050-00 | Rice | cytosol | 21.15 | 21.85 |
| EER98893 | Sorghum | plastid | 26.28 | 21.69 |
| Solyc03g115930.1.1 | Tomato | cytosol | 27.56 | 21.29 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.44 | 21.21 |
| TraesCS5A01G229000.1 | Wheat | plastid | 23.72 | 20.79 |
| TraesCS5D01G238700.1 | Wheat | plastid | 23.08 | 20.69 |
| OQU88717 | Sorghum | cytosol | 23.72 | 20.11 |
| Zm00001d013004_P001 | Maize | vacuole | 27.56 | 19.63 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 24.36 | 19.1 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 25.64 | 18.78 |
| HORVU5Hr1G066260.1 | Barley | plastid | 21.79 | 18.68 |
| Os03t0812800-00 | Rice | extracellular | 25.64 | 18.6 |
| HORVU5Hr1G111520.1 | Barley | plastid | 24.36 | 18.45 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 23.72 | 18.23 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 23.08 | 18.09 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 25.64 | 17.62 |
| Solyc06g069740.1.1 | Tomato | endoplasmic reticulum | 19.23 | 16.22 |
| TraesCS5B01G227700.1 | Wheat | plastid | 20.51 | 14.04 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.2 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | InterPro:IPR002048 | UniProt:K4DC51 | PFAM:PF13499 |
| PRINTS:PR01697 | ScanProsite:PS00018 | PFscan:PS50222 | PANTHER:PTHR10891 | PANTHER:PTHR10891:SF662 | SMART:SM00054 |
| SUPFAM:SSF47473 | EnsemblPlantsGene:Solyc12g009630.1 | EnsemblPlants:Solyc12g009630.1.1 | TMHMM:TMhelix | UniParc:UPI00027699AC | SEG:seg |
Description
No Description!
Coordinates
chr12:-:2891490..2892206
Molecular Weight (calculated)
17575.3 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.203
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLLTILFL AFLFIIGLIT TIFNFPTNKF HSLIQSISLE SQPLQERTIT TPPSSSSTTT SMVDQKKAKS EMNEEEVANK ERDLKEAFDV FDHDKDGLIS
101: EEELSKILSS LGMKEGKKLD HCKEMIKKVD VDGDGMVNFD EFKKMMKACG TLVPFS
101: EEELSKILSS LGMKEGKKLD HCKEMIKKVD VDGDGMVNFD EFKKMMKACG TLVPFS
001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL
Arabidopsis Description
CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.