Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050271 | Potato | cytosol | 74.26 | 72.46 |
| Solyc06g069740.1.1 | Tomato | endoplasmic reticulum | 31.19 | 34.05 |
| Solyc12g009630.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 21.29 | 27.56 |
| Solyc02g067220.2.1 | Tomato | extracellular | 18.81 | 27.14 |
| Solyc02g088090.1.1 | Tomato | extracellular, golgi | 22.28 | 24.86 |
Protein Annotations
| EnsemblPlants:Solyc03g115930.1.1 | EnsemblPlantsGene:Solyc03g115930.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR45512 | PANTHER:PTHR45512:SF1 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SEG:seg | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI0002768D1F | UniProt:K4BL95 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3:-:65502478..65503086
Molecular Weight (calculated)
23258.6 Da
IEP (calculated)
4.065
GRAVY (calculated)
-0.152
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MENIFSISAI SASLLGKKIA DDLNQFFCII LRCTILSILS TFQDLSYCFS LSIRAIGWFF IILRNALTRV DHDTNPPDAK NCGHDYENCD NKEEIVEDKL
101: MGLCNLNENE TEYAEVSSLF DEVEPSFEEI KEAFDVFDEN GDGYIDASEL MKLIWRMGLS EFSMEHCKKM IMAFDENRDG KIEFSEFLKL MEQSFRDPVA
201: LD
101: MGLCNLNENE TEYAEVSSLF DEVEPSFEEI KEAFDVFDEN GDGYIDASEL MKLIWRMGLS EFSMEHCKKM IMAFDENRDG KIEFSEFLKL MEQSFRDPVA
201: LD
001: MTENQLYSFI TMKSSLSKCK QSSSLSFPLF GLINFFLIGF FRWVSFAQLF FSRFWPLVQH QQCVSEKKSK DLEFQTSIKH EEYRDDDDDG LCREDVGMVM
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
101: KSLGLSTDQE NEGLQKQYSS KEVSNLFEEK EPSLEEVKQA FDVFDENRDG FIDPIDLQRV LTILGLKQGS NLENCRRMIR SFDGSKDGRI DFYGFVKFME
201: NNFC
Arabidopsis Description
CML46Probable calcium-binding protein CML45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z27]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.