Factsheet for Bra032444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06192	Canola	cytosol	100.0	100.0
Bra030632.1-P	Field mustard	cytosol	95.83	84.15
Bra000299.1-P	Field mustard	cytosol	83.33	83.33
CDY09996	Canola	cytosol	93.06	73.63
PGSC0003DMT400086481	Potato	cytosol	51.39	41.57
Bra039037.1-P	Field mustard	cytosol	40.28	27.62
Solyc12g009630.1.1	Tomato	endoplasmic reticulum, extracellular, golgi	56.94	26.28
GSMUA_Achr7P21710_001	Banana	cytosol	44.44	23.88
GSMUA_Achr9P17010_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.06	19.87
GSMUA_AchrUn_...	Banana	cytosol	41.67	18.18
Os12t0140050-00	Rice	cytosol	37.5	17.88
OQU88717	Sorghum	cytosol	43.06	16.85
TraesCS1A01G435200.1	Wheat	endoplasmic reticulum, extracellular	43.06	16.67
TraesCS1B01G470900.1	Wheat	endoplasmic reticulum, golgi	43.06	16.67
TraesCS1D01G444200.1	Wheat	endoplasmic reticulum, golgi	44.44	16.58
TraesCS1A01G435100.1	Wheat	extracellular	40.28	16.57
EER98893	Sorghum	plastid	43.06	16.4
Bra030349.1-P	Field mustard	endoplasmic reticulum, plastid	41.67	16.22
Zm00001d005766_P001	Maize	plastid	40.28	16.11
TraesCS5D01G238700.1	Wheat	plastid	38.89	16.09
Bra025654.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.67	15.96
TraesCS5A01G229000.1	Wheat	plastid	38.89	15.73
HORVU1Hr1G094230.1	Barley	extracellular, golgi	40.28	15.59
HORVU1Hr1G094160.1	Barley	extracellular	40.28	15.59
TraesCS1B01G471000.1	Wheat	endoplasmic reticulum, golgi	40.28	15.59
HORVU5Hr1G066260.1	Barley	plastid	38.89	15.38
Bra033077.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	38.89	15.05
Bra028438.1-P	Field mustard	plastid	40.28	14.8
Zm00001d013004_P001	Maize	vacuole	40.28	13.24
OQU90756	Sorghum	endoplasmic reticulum, vacuole	40.28	12.78
Os03t0812400-01	Rice	endoplasmic reticulum, plastid	37.5	12.68
HORVU5Hr1G111520.1	Barley	plastid	34.72	12.14
Os03t0812800-00	Rice	extracellular	36.11	12.09
TraesCS5B01G227700.1	Wheat	plastid	37.5	11.84
TraesCS5A01G467800.1	Wheat	endoplasmic reticulum, plastid	31.94	11.56
TraesCS5D01G481000.1	Wheat	extracellular, plastid	31.94	11.56
TraesCS5B01G480300.1	Wheat	endoplasmic reticulum, plastid	31.94	11.33

Protein Annotations

EnsemblPlants:Bra032444.1	EnsemblPlants:Bra032444.1-P	EnsemblPlantsGene:Bra032444	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR10891
PANTHER:PTHR10891:SF662	PFAM:PF13499	PFscan:PS50222	ScanProsite:PS00018	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0002543523	UniProt:M4EUG2	MapMan:35.1	:	:	:

Description

AT1G05990 (E=6e-035) | calcium-binding protein, putative

Coordinates

chrA09:-:36091965..36092183

Molecular Weight (calculated)

7921.6 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.412

Length

72 amino acids

Sequence
(BLAST)

1: MKEAFNVFDQ NGDGFITVDE LKAVLSSLGL KQGKTLDDCK KMIKQVDVDG DGRVNYKEFR QMMKGGGFSA LG

Best Arabidopsis Sequence Match ( AT1G05990.1 )
(BLAST)

001: MDPTELKRVF QMFDKNGDGT ITGKELSETL RSLGIYIPDK ELTQMIEKID VNGDGCVDID EFGELYKTIM DEEDEEEEDM KEAFNVFDQN GDGFITVDEL
101: KAVLSSLGLK QGKTLDDCKK MIKKVDVDGD GRVNYKEFRQ MMKGGGFNSL

Arabidopsis Description

CML7Calmodulin-like protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.