Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28045 | Canola | cytosol | 92.86 | 92.86 |
| CDY06192 | Canola | cytosol | 66.67 | 77.78 |
| CDY09997 | Canola | cytosol | 65.48 | 76.39 |
| Bra000299.1-P | Field mustard | cytosol | 63.1 | 73.61 |
| CDY09996 | Canola | cytosol | 65.48 | 60.44 |
| PGSC0003DMT400086481 | Potato | cytosol | 47.62 | 44.94 |
| CDY20005 | Canola | cytosol | 38.1 | 30.48 |
| CDX74438 | Canola | cytosol | 38.1 | 29.91 |
| CDY30262 | Canola | cytosol | 38.1 | 29.91 |
| Solyc12g009630.1.1 | Tomato | endoplasmic reticulum, extracellular, golgi | 52.38 | 28.21 |
| GSMUA_Achr7P21710_001 | Banana | cytosol | 39.29 | 24.63 |
| GSMUA_Achr9P17010_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.48 | 21.79 |
| Os12t0140050-00 | Rice | cytosol | 36.9 | 20.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.29 | 20.0 |
| TraesCS1A01G435200.1 | Wheat | endoplasmic reticulum, extracellular | 42.86 | 19.35 |
| TraesCS1A01G435100.1 | Wheat | extracellular | 39.29 | 18.86 |
| TraesCS1D01G444200.1 | Wheat | endoplasmic reticulum, golgi | 42.86 | 18.65 |
| CDX99659 | Canola | extracellular | 39.29 | 18.64 |
| TraesCS1B01G470900.1 | Wheat | endoplasmic reticulum, golgi | 40.48 | 18.28 |
| EER98893 | Sorghum | plastid | 40.48 | 17.99 |
| CDY66024 | Canola | endoplasmic reticulum, extracellular | 39.29 | 17.93 |
| HORVU1Hr1G094230.1 | Barley | extracellular, golgi | 39.29 | 17.74 |
| CDY37011 | Canola | plastid | 40.48 | 17.62 |
| TraesCS5A01G229000.1 | Wheat | plastid | 36.9 | 17.42 |
| OQU88717 | Sorghum | cytosol | 38.1 | 17.39 |
| TraesCS5D01G238700.1 | Wheat | plastid | 35.71 | 17.24 |
| HORVU1Hr1G094160.1 | Barley | extracellular | 38.1 | 17.2 |
| TraesCS1B01G471000.1 | Wheat | endoplasmic reticulum, golgi | 38.1 | 17.2 |
| CDX85236 | Canola | endoplasmic reticulum, extracellular | 38.1 | 17.02 |
| Zm00001d005766_P001 | Maize | plastid | 35.71 | 16.67 |
| HORVU5Hr1G066260.1 | Barley | plastid | 35.71 | 16.48 |
| CDX67435 | Canola | plastid | 38.1 | 16.33 |
| CDY15945 | Canola | plastid | 38.1 | 16.33 |
| CDX74439 | Canola | endoplasmic reticulum, extracellular, plastid, vacuole | 38.1 | 16.08 |
| CDY44416 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.33 | 14.97 |
| Zm00001d013004_P001 | Maize | vacuole | 38.1 | 14.61 |
| TraesCS5B01G227700.1 | Wheat | plastid | 38.1 | 14.04 |
| Os03t0812400-01 | Rice | endoplasmic reticulum, plastid | 34.52 | 13.62 |
| HORVU5Hr1G111520.1 | Barley | plastid | 33.33 | 13.59 |
| Os03t0812800-00 | Rice | extracellular | 34.52 | 13.49 |
| OQU90756 | Sorghum | endoplasmic reticulum, vacuole | 35.71 | 13.22 |
| TraesCS5A01G467800.1 | Wheat | endoplasmic reticulum, plastid | 30.95 | 13.07 |
| TraesCS5D01G481000.1 | Wheat | extracellular, plastid | 30.95 | 13.07 |
| TraesCS5B01G480300.1 | Wheat | endoplasmic reticulum, plastid | 30.95 | 12.81 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078HDS4 | UniProt:A0A078HDS4 | EnsemblPlants:CDY35936 | ProteinID:CDY35936 |
| ProteinID:CDY35936.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00059490001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR10891 | PANTHER:PTHR10891:SF546 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE9592 | SEG:seg |
Description
BnaA05g30140DBnaA05g30140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDS4]
Coordinates
chrLK032364:+:61955..62209
Molecular Weight (calculated)
9484.2 Da
IEP (calculated)
4.156
GRAVY (calculated)
-0.462
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MDDRDEEEDI IEAFNVFDQN RDGFITVEEL RSVLSSLGLK QGRTLEDCKR MISKVDVDGD GMVNFKEFKQ MMKGGGFAAL ESSL
001: MDQAELARIF QMFDRNGDGK ITKQELNDSL ENLGIYIPDK DLVQMIEKID LNGDGYVDIE EFGGLYQTIM EERDEEEDMR EAFNVFDQNR DGFITVEELR
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
101: SVLASLGLKQ GRTLEDCKRM ISKVDVDGDG MVNFKEFKQM MKGGGFAALG SNL
Arabidopsis Description
CML3CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.