Factsheet for VIT_00s1291g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_17s0000g06020.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10520.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT5G10520.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT5G10520.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G10520.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G10520.1	VIT_17s0000g06020.t01	AT3G47620.1	21798944
AT5G10520.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT5G10520.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT5G10520.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74475	Soybean	cytosol	71.48	65.27
Solyc04g014410.2.1	Tomato	cytosol, mitochondrion	69.01	61.44
VIT_00s0929g00020.t01	Wine grape	cytosol	99.65	58.23
Zm00001d047798_P001	Maize	cytosol	26.41	53.19
Zm00001d018955_P001	Maize	cytosol	27.11	47.83
KRH39471	Soybean	cytosol	71.13	44.59
Solyc11g010730.1.1	Tomato	cytosol	76.06	42.86
KRH45545	Soybean	cytosol	71.83	42.77
PGSC0003DMT400041603	Potato	cytosol	75.35	42.63
AT5G65530.1	Thale cress	cytosol	67.96	42.32
PGSC0003DMT400060605	Potato	cytosol	69.72	41.77
KRG99478	Soybean	cytosol	71.13	41.74
Bra024395.1-P	Field mustard	cytosol	65.14	41.02
CDY08783	Canola	cytosol	65.49	40.79
CDY14578	Canola	cytosol	63.73	40.22
AT5G10520.1	Thale cress	cytosol	65.85	40.04
Bra009025.1-P	Field mustard	cytosol	66.55	39.46
CDX69825	Canola	cytosol	66.55	39.46
VIT_14s0030g00390.t01	Wine grape	cytosol	58.45	39.24
Bra031854.1-P	Field mustard	cytosol	64.08	38.97
CDY37833	Canola	cytosol	64.08	38.97
GSMUA_Achr2P02460_001	Banana	cytosol	71.83	38.93
CDX97023	Canola	cytosol	66.55	38.49
CDX85756	Canola	cytosol	64.08	37.6
CDY40103	Canola	cytosol	63.38	37.58
VIT_11s0052g00800.t01	Wine grape	mitochondrion	50.7	37.31
CDY33949	Canola	cytosol	64.44	36.82
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	55.63	36.41
Os06t0663900-03	Rice	cytosol	70.07	35.86
TraesCS7D01G471700.1	Wheat	cytosol	66.9	35.25
TraesCS7A01G484300.1	Wheat	cytosol	66.2	34.94
Zm00001d046941_P001	Maize	cytosol	70.07	34.91
VIT_05s0020g02230.t01	Wine grape	cytosol	59.51	34.7
KXG20550	Sorghum	cytosol	70.07	34.67
Bra028581.1-P	Field mustard	cytosol	47.54	34.01
HORVU7Hr1G109290.2	Barley	cytosol	67.61	33.45
TraesCS7B01G388000.3	Wheat	mitochondrion	66.55	32.59
CDY71497	Canola	cytosol	34.15	30.03
VIT_11s0052g01810.t01	Wine grape	nucleus	53.87	25.42
Zm00001d040679_P001	Maize	plastid	31.34	24.93
VIT_00s0768g00040.t01	Wine grape	cytosol	20.42	23.58
VIT_14s0006g01420.t01	Wine grape	cytosol	40.14	21.97
VIT_03s0038g03600.t01	Wine grape	mitochondrion	36.27	18.2
VIT_03s0038g02400.t01	Wine grape	cytosol	40.49	16.89
VIT_18s0001g01680.t01	Wine grape	cytosol	42.96	16.07
VIT_04s0044g01560.t01	Wine grape	cytosol	40.49	15.11
VIT_18s0001g14690.t01	Wine grape	cytosol	39.79	14.85

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100854520	MapMan:18.4.1.36	MapMan:27.4.7	ProteinID:CCB57451	ProteinID:CCB57451.1
UniProt:F6HRZ2	EMBL:FN596085	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100854520
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF105
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210887A
ArrayExpress:VIT_00s1291g00030	EnsemblPlantsGene:VIT_00s1291g00030	EnsemblPlants:VIT_00s1291g00030.t01	RefSeq:XP_003635543	RefSeq:XP_003635543.1	RefSeq:XP_003635543.2

Description

No Description!

Coordinates

chrUn:-:38386259..38388117

Molecular Weight (calculated)

31945.4 Da

IEP (calculated)

6.454

GRAVY (calculated)

-0.222

Length

284 amino acids

Sequence
(BLAST)

001: MKKEKEHEER TGDFLSELGI IAHIDHPNAA RLIGFGVDGG LHLVLQFSPQ GSLASVLHGT TESLEWKIRF KVAVGVAEGL QYLHQGCHRR IIHRDIKASN
101: ILLTQDYQPQ ISDFGLAKWL PDKWAHHVVF PIEGTFGYLA PEYFMHGIVD EKTDVFAFGV LLLELITGRH AVDSSRQSLV IWAKPLLDAN DVKELADSRL
201: GDCYDLGEMK RAMLTASMCI HHSSSMRPEM NRVVQLLRGE GKSPEPKQKS NVGRALILDD SDLADYTPTS YLRDLNRHME LVLE

Best Arabidopsis Sequence Match ( AT5G65530.1 )
(BLAST)

001: MAVEEMEKKI KGSQETELHK NDLSIEDPSP RCVLEIPVMS SDSDNSSSCS SCSPDKSSSP LSTTPPNVSS FHQWNKMIES IKKKSIRRFS VIPLLASYEL
101: TRKKKQPKLS PCSENDFDCD QILVAKPSWR NFTFDELVAA TDNFNPENMI GKGGHAEVYK GVLPDGETVA IKKLTRHAKE VEERVSDFLS ELGIIAHVNH
201: PNAARLRGFS CDRGLHFVLE YSSHGSLASL LFGSEECLDW KKRYKVAMGI ADGLSYLHND CPRRIIHRDI KASNILLSQD YEAQISDFGL AKWLPEHWPH
301: HIVFPIEGTF GYLAPEYFMH GIVDEKTDVF AFGVLLLEII TGRRAVDTDS RQSIVMWAKP LLEKNNMEEI VDPQLGNDFD ETEMKRVMQT ASMCIHHVST
401: MRPDMNRLVQ LLRGDDQLAE QKPGGARTVS LDDCDLDHTS SSYLNDLTRH RQLLME

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KI00]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.