Factsheet for VIT_11s0052g01810.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18978	Soybean	cytosol, plasma membrane, plastid	65.12	64.9
KRH02917	Soybean	cytosol	64.78	64.36
PGSC0003DMT400070634	Potato	cytosol	60.3	59.02
Solyc07g006620.2.1	Tomato	cytosol, nucleus, plasma membrane	60.8	55.45
VIT_00s1291g00030.t01	Wine grape	cytosol	25.42	53.87
AT5G57670.2	Thale cress	cytosol	51.66	53.71
Bra002708.1-P	Field mustard	nucleus	51.0	53.02
VIT_11s0052g00800.t01	Wine grape	mitochondrion	33.89	52.85
CDY49731	Canola	nucleus	50.83	52.76
GSMUA_Achr2P04970_001	Banana	cytosol, nucleus, plasma membrane, plastid	53.99	52.0
Os08t0249100-01	Rice	cytosol	51.0	51.08
KXG24831	Sorghum	cytosol	50.83	50.66
GSMUA_Achr9P19620_001	Banana	cytosol	53.82	50.39
HORVU7Hr1G112910.11	Barley	cytosol	49.83	49.1
TraesCS7B01G409600.1	Wheat	cytosol	49.17	48.84
TraesCS7A01G502700.1	Wheat	cytosol	49.17	48.68
Zm00001d024199_P002	Maize	cytosol, nucleus, plasma membrane	50.33	48.64
TraesCS7D01G490000.2	Wheat	cytosol	49.0	48.44
CDY25891	Canola	cytosol	35.22	47.43
VIT_14s0030g00390.t01	Wine grape	cytosol	30.4	43.26
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	29.73	41.24
VIT_00s0929g00020.t01	Wine grape	cytosol	32.72	40.53
VIT_05s0020g02230.t01	Wine grape	cytosol	31.4	38.81
VIT_14s0006g01420.t01	Wine grape	cytosol	25.91	30.06
VIT_00s0768g00040.t01	Wine grape	cytosol	11.63	28.46
VIT_03s0038g02400.t01	Wine grape	cytosol	30.07	26.58
VIT_18s0001g01680.t01	Wine grape	cytosol	32.72	25.96
VIT_04s0044g01560.t01	Wine grape	cytosol	31.89	25.23
VIT_03s0038g03600.t01	Wine grape	mitochondrion	23.42	24.91
VIT_18s0001g14690.t01	Wine grape	cytosol	27.24	21.55

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100261525	wikigene:100261525	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20
Gene3D:3.40.50.620	ProteinID:CCB44591	ProteinID:CCB44591.1	UniProt:F6GXA5	EMBL:FN594964	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100261525	wikigene:LOC100261525
PFAM:PF00582	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF506	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SUPFAM:SSF52402
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210837C	InterPro:UspA	ArrayExpress:VIT_11s0052g01810
EnsemblPlantsGene:VIT_11s0052g01810	EnsemblPlants:VIT_11s0052g01810.t01	RefSeq:XP_002271849	RefSeq:XP_002271849.2	RefSeq:XP_010656799.1	SEG:seg

Description

No Description!

Coordinates

chr11:-:19627835..19630993

Molecular Weight (calculated)

67249.3 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.370

Length

602 amino acids

Sequence
(BLAST)

001: MAPMAPAKIL IGISLDSDDS KELLSWAIRI LAHPNDTVVA LHVIVGEDMK KPELMTKDQT RFRRAKAFVI SLVGEFAETC QSKQINLEVK VGFSSSIGKG
101: LVEEAKSISA EFLLIGGSRN RSNRISRKKT RYCFENAQEG CAVISIGKCG QTQKYSDSNS THSEEFRQIS SRRSNKEVVS AVQKLVTSKS KREKSTRKAV
201: LDGSEGESHT TEDSFSFGDS SITESPPLAS KLKGQSNFRK QLSPIKIISS FLLSPFNLSG RKRNERLSDK EKHQPLLRCF SYEEISKATN NFHPDNMVGQ
301: GGYSEVYRGH LDNGQIVAVK RLAKDNADEN KEKEFLIELG IIGHVCHPNT ANLVGCCIEN GLHLIFNFSP NGTLSSALHG KTGKPLEWPD RYKIVTGVAR
401: GLHYLHKCCK HRIIHRDIKA SNVLLGSDFE PQISDFGLAK WLPNKWTHHS VIPIEGTFGY LAPEYFMHGI VDEKTDVFAF GVLLLEIITG RRPVDSSKQN
501: LLLWAKPLME SGDIYELADP KLGGKYDVEQ MYRLVLTASY CVRQTSIWRP SMSEVLALLT DGGDSAVARR WRVPKYTSDE MDEYSMVFGS DVPTDIVLDD
601: DY

Best Arabidopsis Sequence Match ( AT5G57670.2 )
(BLAST)

001: MISCSEEGSN KILVAISLDR DESQNVLSWA INVLAKPSDT VVALHLLVGE EPRKLPMKKK KRTQIRHAKA HVISMLGEFA YTCCHNQVNL EAKVGFSSNI
101: GRGLIDEVKS ISAHYLVLSR PTTHEFRIWN DIKRYVSDFA PSSCSVVLVG NQRKPHKDCY SDSAISLDIN SEKYSPRSVL NTLSRDSLSS SGDDASSFNG
201: SMVSSSFASP SDKPKHKSIS PYKFISSLIM NSPLRKWRGS ETKNKPKPQP LIQCFTYNEI SKATNDFHQG NIVGIGGYSE VYRGDLWDGR RIAVKRLAKE
301: SGDMNKEKEF LTELGIISHV SHPNTALLLG CCVEKGLYLV FRFSENGTLY SALHENENGS LDWPVRYKIA VGVARGLHYL HKRCNHRIIH RDIKSSNVLL
401: GPDYEPQITD FGLAKWLPNK WTHHAVIPVE GTFGYLAPES LMQGTIDEKT DIYAFGILLL EIITGRRPVN PTQKHILLWA KPAMETGNTS ELVDPKLQDK
501: YDDQQMNKLV LTASHCVQQS PILRPTMTQV LELLTNGNEA EIAKSWRMPK DMTNDDDDNN EWDDYSMIFG YDVPSDSSF

Arabidopsis Description

Probable receptor-like serine/threonine-protein kinase At5g57670 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.