Factsheet for VIT_03s0038g02400.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24315	Soybean	cytosol	59.03	60.82
KRH29291	Soybean	cytosol, golgi, nucleus	58.59	60.73
CDY72015	Canola	cytosol	30.1	60.12
CDY71941	Canola	cytosol	29.52	60.0
CDY26785	Canola	mitochondrion, plastid	35.24	57.69
CDY47477	Canola	mitochondrion, plastid	34.8	56.97
PGSC0003DMT400015833	Potato	cytosol	55.95	55.38
AT4G35030.5	Thale cress	cytosol	36.42	55.36
Solyc01g111570.2.1	Tomato	cytosol	55.65	55.01
CDX75481	Canola	cytosol	31.13	52.74
AT2G16750.2	Thale cress	endoplasmic reticulum	47.28	52.19
CDX69106	Canola	cytosol, plastid	36.56	51.34
GSMUA_Achr1P02390_001	Banana	cytosol	46.84	51.12
GSMUA_Achr11P...	Banana	cytosol	45.08	49.36
Bra001996.1-P	Field mustard	cytosol	45.96	49.21
Os03t0241600-01	Rice	cytosol	46.55	48.62
GSMUA_Achr5P18920_001	Banana	cytosol	42.14	48.4
GSMUA_Achr4P25730_001	Banana	cytosol	47.43	48.07
EER92574	Sorghum	cytosol	46.4	48.02
TraesCS4B01G228200.1	Wheat	cytosol	46.11	47.94
TraesCS4D01G229100.2	Wheat	cytosol	45.96	47.71
HORVU4Hr1G064010.3	Barley	cytosol	46.11	47.36
TraesCS4A01G072300.1	Wheat	cytosol	45.96	47.28
Bra037291.1-P	Field mustard	mitochondrion, plastid	35.24	46.69
Bra011579.1-P	Field mustard	nucleus	25.7	45.93
Zm00001d028386_P001	Maize	cytosol	46.26	45.32
VIT_18s0001g01680.t01	Wine grape	cytosol	45.37	40.71
VIT_00s1291g00030.t01	Wine grape	cytosol	16.89	40.49
VIT_04s0044g01560.t01	Wine grape	cytosol	43.91	39.29
VIT_18s0001g14690.t01	Wine grape	cytosol	42.88	38.37
VIT_11s0052g00800.t01	Wine grape	mitochondrion	20.26	35.75
VIT_14s0030g00390.t01	Wine grape	cytosol	20.7	33.33
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	21.15	33.18
VIT_14s0006g01420.t01	Wine grape	cytosol	24.82	32.56
VIT_00s0929g00020.t01	Wine grape	cytosol	22.91	32.1
VIT_05s0020g02230.t01	Wine grape	cytosol	22.32	31.21
VIT_03s0038g03600.t01	Wine grape	mitochondrion	25.4	30.57
VIT_11s0052g01810.t01	Wine grape	nucleus	26.58	30.07
VIT_00s0768g00040.t01	Wine grape	cytosol	8.37	23.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100245139	wikigene:100245139	MapMan:18.4.1.36	Gene3D:3.30.200.20	Gene3D:3.40.50.620
EMBL:AM431253	ProteinID:CAN73629	ProteinID:CAN73629.1	ProteinID:CCB60620	ProteinID:CCB60620.1	UniProt:F6I104
EMBL:FN596508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100245139	wikigene:LOC100245139	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF44	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SUPFAM:SSF52402	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210A7EA	ArrayExpress:VIT_03s0038g02400	EnsemblPlantsGene:VIT_03s0038g02400	EnsemblPlants:VIT_03s0038g02400.t01	unigene:Vvi.20550
RefSeq:XP_002277797	RefSeq:XP_002277797.2	RefSeq:XP_010646843.1	RefSeq:XP_010646849.1	RefSeq:XP_010646856.1	RefSeq:XP_010646857.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:1670897..1674028

Molecular Weight (calculated)

75854.2 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.365

Length

681 amino acids

Sequence
(BLAST)

001: MTVEVVEKKN VLVGIRVDSH SRELLNWAIV KVAEPGDCVV AVHVSEDLSL RDKLLLEGYL EVHERLCDIK QVDLIGQVLP GRSIKRVLVR EAKRCAAAAV
101: VVGINWKNAI GGWASMARYC AKRLPSDTEV LAIHNGKVVF RRCSNGQIPG DPRPSFYLPG NSNPRETQSE FADSEASDIE RASSVVLQSY EEGSDKGLKD
201: NNFSLGNEHK KVSRRSNSLF VGDPSEQRPG WPLLRRTNSV IPQAPNGRTM SVVQWVMSLP DRSPPETPQC PDKTESPLGS GIGQFTNKIN QNRSSSWVEL
301: PKELELLLKT NSSDCRWFSH EVLKASTSQF SSENLIGKGG CNRVYKGILP NSKQVAVKVL KSSKEAWKDF AMEVNIMSSL KHRHIAPLLG ICLEDSHLIS
401: VYEFFSRGSL EENLHGSIKH KSALSWEVRF NLAVGVAEAL NYLHNECSKP VIHRDIKSSN ILLSNDFEPQ LADFGLAIWG PTTSSFLTHG DVVGTFGYLA
501: PEYFMYGKVS DKIDVYSFGV VLLELLSGRK PIGSESPKGQ ESLVMWAKPI LESGNLRSIM DPDLDGKFDE VQMQRTVLAA TLCITQAARR RPKISQILKL
601: LRGEKDVAKW VNSQIEDQHD LENQDENDDE VYPDSSAESH LGLALLDVDD NFTSFSSMEQ GNRLSLEEYM KGRWSRSSSL E

Best Arabidopsis Sequence Match ( AT2G16750.2 )
(BLAST)

001: MAVDKVIVKQ RNIILVGIPI DESGVEVLKW ALEEVAKHGD CVVVVHVCFT YYRALKSKSS LDRYLKPYIE FCSTKKIELK GEVLKGNSVL GVLVKEAKRY
101: NAMSVVVGVK QQSKLSLKIA KGCAKELPST TDILAIHRGN IVFRRSNHYQ LPLAQKISSR PSSELSEGFS DKDLAKTTGQ EKRKISGRSL SLPSVEVVDQ
201: TPGWPLLRTS TLATPMVQHQ TRKISVVNWV MSLPERFPHH PNQTCQQSFC DKQLKDILKD INRWFSYDVL KTATSDFSLE NLIGKGGCNE VYKGFLEDGK
301: GVAVKILKPS VKEAVKEFVH EVSIVSSLSH SNISPLIGVC VHYNDLISVY NLSSKGSLEE TLQGKHVLRW EERLKIAIGL GEALDYLHNQ CSNPVIHRDV
401: KSSNVLLSDE FEPQLSDFGL SMWGSKSCRY TIQRDVVGTF GYLAPEYFMY GKVSDKVDVY AFGVVLLELI SGRTSISSDS PRGQESLVMW AKPMIEKGNA
501: KELLDPNIAG TFDEDQFHKM VLAATHCLTR AATYRPNIKE ILKLLRGEDD VSKWVKIEED DEDGFDDEVY PNSNTELHLS LAMVDVEDND SVSNSSLERS
601: NNSLFSSSSS SSQELQS

Arabidopsis Description

At2g16750 [Source:UniProtKB/TrEMBL;Acc:B5X4Z9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.