Factsheet for VIT_11s0052g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013990	Potato	mitochondrion	71.76	73.87
KRH19036	Soybean	mitochondrion	72.02	73.16
Solyc07g018140.2.1	Tomato	mitochondrion	71.5	73.02
KRH02851	Soybean	mitochondrion	71.76	72.89
KRH12238	Soybean	mitochondrion	68.91	71.7
KRH37271	Soybean	mitochondrion	68.39	71.16
CDY49301	Canola	mitochondrion	69.17	68.99
Bra038555.1-P	Field mustard	mitochondrion	67.36	68.78
CDY30299	Canola	mitochondrion	68.91	68.73
Bra038828.1-P	Field mustard	mitochondrion	68.91	68.73
CDY49535	Canola	mitochondrion	68.13	68.67
CDY52583	Canola	mitochondrion	68.65	68.48
AT2G18890.1	Thale cress	mitochondrion	69.17	68.11
GSMUA_Achr5P24180_001	Banana	mitochondrion	63.73	66.67
CDY49158	Canola	cytosol	26.68	64.38
GSMUA_Achr10P...	Banana	mitochondrion	63.73	62.76
EES11570	Sorghum	cytosol, mitochondrion	61.66	62.47
Os04t0654600-01	Rice	cytosol, mitochondrion	62.69	61.89
Zm00001d002026_P001	Maize	mitochondrion	61.14	60.98
TraesCS2B01G532900.1	Wheat	cytosol, mitochondrion	61.14	60.82
TraesCS2A01G504700.1	Wheat	cytosol, mitochondrion	60.1	60.42
TraesCS2D01G505400.1	Wheat	cytosol, mitochondrion	61.14	59.9
Os06t0693200-01	Rice	mitochondrion	60.62	59.69
HORVU7Hr1G099220.3	Barley	mitochondrion	59.59	59.59
GSMUA_Achr5P21870_001	Banana	mitochondrion	62.44	59.36
TraesCS7D01G424500.1	Wheat	mitochondrion	58.55	57.36
EER88873	Sorghum	mitochondrion	59.07	57.29
TraesCS7B01G333200.1	Wheat	mitochondrion	57.51	56.63
TraesCS7A01G432900.1	Wheat	mitochondrion	57.25	56.09
GSMUA_Achr6P03860_001	Banana	cytosol	64.25	55.86
Zm00001d014583_P001	Maize	mitochondrion	58.03	55.45
GSMUA_Achr4P02180_001	Banana	plastid	59.07	55.21
VIT_00s1291g00030.t01	Wine grape	cytosol	37.31	50.7
VIT_14s0030g00390.t01	Wine grape	cytosol	41.71	38.06
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	42.23	37.56
VIT_00s0929g00020.t01	Wine grape	cytosol	46.63	37.04
VIT_05s0020g02230.t01	Wine grape	cytosol	43.01	34.09
VIT_11s0052g01810.t01	Wine grape	nucleus	52.85	33.89
VIT_00s0768g00040.t01	Wine grape	cytosol	15.8	24.8
VIT_14s0006g01420.t01	Wine grape	cytosol	32.12	23.89
VIT_03s0038g03600.t01	Wine grape	mitochondrion	30.31	20.67
VIT_18s0001g01680.t01	Wine grape	cytosol	39.9	20.29
VIT_03s0038g02400.t01	Wine grape	cytosol	35.75	20.26
VIT_04s0044g01560.t01	Wine grape	cytosol	38.34	19.45
VIT_18s0001g14690.t01	Wine grape	cytosol	33.68	17.08

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266827	wikigene:100266827	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20
ProteinID:CBI17846	ProteinID:CBI17846.3	UniProt:D7SQB5	EMBL:FN594964	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100266827	wikigene:LOC100266827	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF34	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001984393
ArrayExpress:VIT_11s0052g00800	EnsemblPlantsGene:VIT_11s0052g00800	EnsemblPlants:VIT_11s0052g00800.t01	unigene:Vvi.16520	RefSeq:XP_002269944	RefSeq:XP_002269944.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:18358275..18361493

Molecular Weight (calculated)

43413.0 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.413

Length

386 amino acids

Sequence
(BLAST)

001: MRYIRSGSFK RLFSAKRRSF EEESQTPGGC AHDDGNEAFG VGGNETKHPQ KPTWKCFSYE EIFHATSGFS SDNLVGKGGY AEVYRGTLED GEAVAVKRLT
101: KASTDERKEK EFLTEIGTIG HVCHPNVSSL LGCCIDNGLY LIFQFFSRGS VSSVLHDENS LSLDWKIRYK IAVGTARGLH YLHKGCQRRI IHRDIKASNV
201: LLTADYEPQI SDFGLAKWLP SQWTHHSIVP IEGTFGHLAP EYFMHGIVDE KTDVFAFGVF LLEIISGRKP VDGSHQSLHS WARPILNQGE IEKVVDPRLG
301: GIYDVAQLKR LTFASSLCIR SSSIWRPTMS EVLEAMLGGE IDEERWKMPE EEEEQEEFWG FDDLECESDS SFSTSPHDSI STRSIS

Best Arabidopsis Sequence Match ( AT2G18890.1 )
(BLAST)

001: MKYIRSNSLK RLFSFKRRSF DSDSSENSSP LAASSTKCVE GFQETDQFQR PKWKCFSFQE IYDATNGFSS ENLVGRGGFA EVYKGILGKN GEEIAVKRIT
101: RGGRDDERRE KEFLMEIGTI GHVSHPNVLS LLGCCIDNGL YLVFIFSSRG SLASLLHDLN QAPLEWETRY KIAIGTAKGL HYLHKGCQRR IIHRDIKSSN
201: VLLNQDFEPQ ISDFGLAKWL PSQWSHHSIA PIEGTFGHLA PEYYTHGIVD EKTDVFAFGV FLLELISGKK PVDASHQSLH SWAKLIIKDG EIEKLVDPRI
301: GEEFDLQQLH RIAFAASLCI RSSSLCRPSM IEVLEVLQGE DIEKEKWKME EEEEVKEEFW GYEDLEDCEC DSSISLSPPD SISNRSSSHR SR

Arabidopsis Description

At2g18890 [Source:UniProtKB/TrEMBL;Acc:O64619]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.