Factsheet for VIT_14s0030g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68618	Soybean	cytosol	46.1	64.14
Bra001138.1-P	Field mustard	cytosol	53.9	60.96
VIT_00s1291g00030.t01	Wine grape	cytosol	39.24	58.45
CDX74151	Canola	cytosol	56.97	53.67
CDY40698	Canola	cytosol	56.97	53.67
GSMUA_AchrUn_...	Banana	mitochondrion	48.23	52.44
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	52.48	51.15
KRG92811	Soybean	cytosol	59.81	50.91
Solyc01g098440.1.1	Tomato	cytosol	57.45	49.59
VIT_05s0020g02230.t01	Wine grape	cytosol	56.97	49.49
GSMUA_Achr1P25900_001	Banana	cytosol	48.94	48.82
Bra039458.1-P	Field mustard	cytosol	56.97	48.2
CDY41938	Canola	cytosol	56.97	48.01
CDY27793	Canola	cytosol	56.97	48.01
AT3G05140.2	Thale cress	cytosol	56.97	47.44
KRH33992	Soybean	cytosol	57.92	43.83
VIT_00s0929g00020.t01	Wine grape	cytosol	50.35	43.83
VIT_11s0052g00800.t01	Wine grape	mitochondrion	38.06	41.71
VIT_00s0768g00040.t01	Wine grape	cytosol	20.09	34.55
VIT_11s0052g01810.t01	Wine grape	nucleus	43.26	30.4
VIT_14s0006g01420.t01	Wine grape	cytosol	31.21	25.43
VIT_03s0038g03600.t01	Wine grape	mitochondrion	28.84	21.55
VIT_03s0038g02400.t01	Wine grape	cytosol	33.33	20.7
VIT_18s0001g01680.t01	Wine grape	cytosol	35.7	19.89
VIT_18s0001g14690.t01	Wine grape	cytosol	34.04	18.92
VIT_04s0044g01560.t01	Wine grape	cytosol	33.57	18.66

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100260540	wikigene:100260540	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20
EMBL:AM439216	ProteinID:CAN71781	ProteinID:CAN71781.1	ProteinID:CCB58161	ProteinID:CCB58161.1	UniProt:F6HTZ9
EMBL:FN596249	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	GO:GO:0051020	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260540	wikigene:LOC100260540
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF188
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210806D
ArrayExpress:VIT_14s0030g00390	EnsemblPlantsGene:VIT_14s0030g00390	EnsemblPlants:VIT_14s0030g00390.t01	RefSeq:XP_002264044	RefSeq:XP_002264044.2	SEG:seg

Description

No Description!

Coordinates

chr14:+:4219953..4228255

Molecular Weight (calculated)

48223.8 Da

IEP (calculated)

8.551

GRAVY (calculated)

-0.445

Length

423 amino acids

Sequence
(BLAST)

001: MKKGKDEHTP KGILEFCAES FVPEMQTSCL GSSESKRSRA RSHWRSFLNR FTKNSVIRFP SLTPVMSKRS RGKSQSAREN VLAVNTFNSS WKNFSLVELQ
101: NATKNFHHEN LIGKGGYAEV YKGRLKDGQF IAIKRLTQGT PEERVMSFLH ELGIIAHVNH PNTAKLIGYG VQGGLHLVLQ LSPLGSLGSL LHVTKSKLEW
201: SSRYKIALGT ADGLRYLHEH CQRRIIHRDI KADNILLTED FEPQICDFGL AKWLPKQWTH FNVTKFEGTF GYFAPEYFMH GIVDEKTDIF SFGVLLLELI
301: TGRRAVDHMK QSLVVWAKPL LYKNSVAELV DPALDEYDEE EMDRMLLTAS LCIEQSPVLR PRMNQASTNF RKVVVLLRGD EYNPDGAQES QNHMPKRTYS
401: NEILDAAEYN STKCLDERLG EDQ

Best Arabidopsis Sequence Match ( AT3G05140.2 )
(BLAST)

001: MAVDQSKEAS PVCCALPMYN SKYSSYVTEE DPNDINHTSK HKRTNAFLMN SASAHDLRLL EVDKEKQDPK SPRGALEACL TRCSISSASS SSDDPPPNRE
101: AIDNADADTD VQCKNHRASS NWGKFFKLWK RRSMKRLSSF PPLSGAAPPI IKQNKSADPN MNGMVLHDIY DFQSSLQNFS ISDIEIATDN FSPENIIGRG
201: GYADVYQGIL PEGKLIAVKR LTKGTPDEQT AEFLSELGII AHVDHPNTAK FIGCCIEGGM HLVFRLSPLG SLGSLLHGPS KYKLTWSRRY NVALGTADGL
301: VYLHEGCQRR IIHRDIKADN ILLTEDFQPQ ICDFGLAKWL PKQLTHHNVS KFEGTFGYFA PEYFMHGIVD EKTDVFAFGV LLLELITGHP ALDESQQSLV
401: LWAKPLLERK AIKELVDPSL GDEYNREELI RLTSTASLCI DQSSLLRPRM SQVVELLLGH EDVVMTPREA KIKMMQRTYS EELLDSVEYN STKYLGDLDR
501: IREVALAS

Arabidopsis Description

RBK2RBK2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.