Factsheet for Solyc01g098440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001138.1-P	Field mustard	cytosol	45.92	60.16
KRH68618	Soybean	cytosol	36.73	59.21
VIT_14s0030g00390.t01	Wine grape	cytosol	49.59	57.45
CDX74151	Canola	cytosol	50.82	55.46
CDY40698	Canola	cytosol	50.61	55.23
KRG92811	Soybean	cytosol	54.29	53.52
Solyc09g074250.2.1	Tomato	cytosol	38.78	52.92
Solyc04g014410.2.1	Tomato	cytosol, mitochondrion	33.67	51.72
GSMUA_AchrUn_...	Banana	mitochondrion	41.02	51.67
CDY27793	Canola	cytosol	52.04	50.8
CDY41938	Canola	cytosol	52.04	50.8
Bra039458.1-P	Field mustard	cytosol	51.63	50.6
AT3G05140.2	Thale cress	cytosol	51.43	49.61
GSMUA_Achr1P25900_001	Banana	cytosol	41.63	48.11
KRH33992	Soybean	cytosol	54.69	47.94
Solyc01g080520.2.1	Tomato	cytosol	41.63	42.06
Solyc11g010730.1.1	Tomato	cytosol	42.86	41.67
Solyc07g018140.2.1	Tomato	mitochondrion	30.82	39.95
Solyc06g054480.2.1	Tomato	cytosol	39.18	37.65
Solyc09g072510.1.1	Tomato	cytosol	14.9	35.96
Solyc07g006620.2.1	Tomato	cytosol, nucleus, plasma membrane	35.92	26.67
Solyc01g111950.2.1	Tomato	plastid	26.94	23.4
Solyc02g063330.2.1	Tomato	cytosol	24.08	22.65
Solyc02g091470.2.1	Tomato	cytosol	23.88	22.63
Solyc01g068270.2.1	Tomato	cytosol	29.18	19.94
Solyc01g111570.2.1	Tomato	cytosol	27.96	19.88
Solyc04g057930.2.1	Tomato	cytosol	29.8	18.99

Protein Annotations

Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	GO:GO:0051020	InterPro:IPR000719	UniProt:K4B0N1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF188
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc01g098440.1
EnsemblPlants:Solyc01g098440.1.1	UniParc:UPI00027687BC	SEG:seg	:	:	:

Description

Receptor-like cytosolic serine/threonine-protein kinase RBK2 [Source:Projected from Arabidopsis thaliana (AT3G05140) UniProtKB/Swiss-Prot;Acc:Q8RXC8]

Coordinates

chr1:-:88959126..88963316

Molecular Weight (calculated)

55621.7 Da

IEP (calculated)

8.810

GRAVY (calculated)

-0.387

Length

490 amino acids

Sequence
(BLAST)

001: MQNIPQHLLK MDDVLVVDLR MFEMEREKHD DGSPGGVMEV GIRNTENGSI SPTDKPSGSR TRLSNPRTSS RWHKFFKMWK RSSVKRLPSF PPLAVPTMST
101: RKSRSARENV AAGIYHFTSS WKNFSLSELK SATNNFSKDN LIGKGGYAEV YKGCLPDGQL IAVKCLNKGT EAQQEQSFLC EIGTIAHVDH PNTARMVGYG
201: VEGGTYLVLQ LSSQGSLGSF LRGSREKLDW AARYKIIFGI ANGLMYLHEN CQRRIIHRDI KADNILLTED FVPQICDFGL AKWLPKEWTH HNVGKFEGTF
301: GSVVLKSYIK SIENFSDIFI YLARRSNAFF LDIVSYFAPE YFMHGTVDEK TDVFSFGVLL LEIITGRQAL DDSQQSLVIW AKPLLHKHNV KELIDPVLGD
401: NYNPKEMNRV IITAGLCVEQ NPLMRPRMNQ AIVLMKTEDD CYKHNFQRKR TYSEELLDAA EYNSTKCLND FKQLNLRSSV SDNNMKTSAA

Best Arabidopsis Sequence Match ( AT3G05140.2 )
(BLAST)

001: MAVDQSKEAS PVCCALPMYN SKYSSYVTEE DPNDINHTSK HKRTNAFLMN SASAHDLRLL EVDKEKQDPK SPRGALEACL TRCSISSASS SSDDPPPNRE
101: AIDNADADTD VQCKNHRASS NWGKFFKLWK RRSMKRLSSF PPLSGAAPPI IKQNKSADPN MNGMVLHDIY DFQSSLQNFS ISDIEIATDN FSPENIIGRG
201: GYADVYQGIL PEGKLIAVKR LTKGTPDEQT AEFLSELGII AHVDHPNTAK FIGCCIEGGM HLVFRLSPLG SLGSLLHGPS KYKLTWSRRY NVALGTADGL
301: VYLHEGCQRR IIHRDIKADN ILLTEDFQPQ ICDFGLAKWL PKQLTHHNVS KFEGTFGYFA PEYFMHGIVD EKTDVFAFGV LLLELITGHP ALDESQQSLV
401: LWAKPLLERK AIKELVDPSL GDEYNREELI RLTSTASLCI DQSSLLRPRM SQVVELLLGH EDVVMTPREA KIKMMQRTYS EELLDSVEYN STKYLGDLDR
501: IREVALAS

Arabidopsis Description

RBK2RBK2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.