Factsheet for VIT_04s0044g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g01680.t01	Wine grape	cytosol	59.79	59.95
GSMUA_Achr7P23280_001	Banana	cytosol	46.25	54.32
GSMUA_Achr6P18680_001	Banana	cytosol	45.99	50.0
GSMUA_Achr6P25830_001	Banana	cytosol, nucleus, plasma membrane	48.09	48.54
TraesCS4A01G221700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	44.15	46.03
Os11t0194900-01	Rice	cytosol	40.34	46.03
TraesCS4B01G099900.2	Wheat	mitochondrion, plastid	44.02	45.89
TraesCS4D01G096100.3	Wheat	plastid	43.76	45.43
TraesCS5B01G115700.1	Wheat	plastid	28.52	44.74
KXG27975	Sorghum	plastid	43.23	44.64
Zm00001d053080_P002	Maize	mitochondrion, plastid	43.23	44.52
VIT_03s0038g02400.t01	Wine grape	cytosol	39.29	43.91
HORVU4Hr1G017860.2	Barley	mitochondrion, plastid	43.63	41.92
Os12t0180500-00	Rice	mitochondrion	39.42	41.15
HORVU5Hr1G037570.3	Barley	cytosol, nucleus	35.87	40.62
VIT_00s1291g00030.t01	Wine grape	cytosol	15.11	40.49
TraesCS5D01G125300.1	Wheat	mitochondrion	38.24	39.27
TraesCS5A01G114900.1	Wheat	mitochondrion	38.11	39.19
VIT_11s0052g00800.t01	Wine grape	mitochondrion	19.45	38.34
Zm00001d023588_P001	Maize	cytosol	32.46	38.29
OQU78841	Sorghum	mitochondrion	36.4	35.7
VIT_03s0038g03600.t01	Wine grape	mitochondrion	25.76	34.63
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	19.58	34.33
VIT_14s0006g01420.t01	Wine grape	cytosol	23.13	33.91
VIT_14s0030g00390.t01	Wine grape	cytosol	18.66	33.57
HORVU0Hr1G029980.2	Barley	vacuole	24.31	32.98
VIT_11s0052g01810.t01	Wine grape	nucleus	25.23	31.89
VIT_00s0929g00020.t01	Wine grape	cytosol	20.24	31.69
VIT_05s0020g02230.t01	Wine grape	cytosol	20.24	31.62
VIT_18s0001g14690.t01	Wine grape	cytosol	30.88	30.88
VIT_00s0768g00040.t01	Wine grape	cytosol	7.36	22.76

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100243137	wikigene:100243137	MapMan:18.4.1.36	Gene3D:3.30.200.20	EMBL:AM479436
ProteinID:CAN81737	ProteinID:CAN81737.1	ProteinID:CCB60397	ProteinID:CCB60397.1	UniProt:F6I0D1	EMBL:FN596506
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243137	wikigene:LOC100243137	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF244	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC59500	UniParc:UPI000210A7CC
ArrayExpress:VIT_04s0044g01560	EnsemblPlantsGene:VIT_04s0044g01560	EnsemblPlants:VIT_04s0044g01560.t01	unigene:Vvi.15462	RefSeq:XP_002264653	RefSeq:XP_002264653.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:23153089..23156975

Molecular Weight (calculated)

84286.4 Da

IEP (calculated)

6.188

GRAVY (calculated)

-0.279

Length

761 amino acids

Sequence
(BLAST)

001: MQRKEEGAQT TSFQDLKTTP LRNLPPGTEN SRMELVGESE ESGGGSGGDG RSVVVVGVKL DQRSKELLTW ALVKVAQSGD RVVAVHVLTD AAAVTMTGGK
101: SSLLSLFDTF KTLLAAYEGF CNLKQVELKL KVCRGSSVPK ILVREAKSHA NVKVIVGISR TNHTIWRSPA WVAKYCARKL SSNFSVFAVD NGKIVFQRRA
201: TAKTTDYSRV VALNQDSGSY LQKARSLCGR NTLIRSFLSC SPYSVLPEKD CSQVMEELSD EDESIEDNSF ALVPIEPMES VSCSNSVVVD DFPELKPVRL
301: SLRRIFLRNR QSSEKSSLRK MPLSQWVLRL PSCHNSAVVY PDKKHSSSDS DQDEDHSANL DGEKGAILLL GSDAGFTPES PNGSAKSLPK ELEGLHEKYS
401: STCRLFTYQE LLLATSNFRP ENMVGKGGNS QVYKGCLPDD RELAVKILKQ SGDVLKEFVL EIEIITTLHH KNIISLFGFC FEDNNLLLVY DFLSRGSLEE
501: NLHGKKKDPM TFGWGERYRV ALGVAEALDY LHNGCGQPVI HRDVKSSNIL LSDDFEPQLS DFGLAAWANT ASHKNCPDVA GTFGYLAPEY FMYGKVNDKI
601: DVYAFGVVLL ELLSGRKPIS SEYPKGQESL VMWAKPILRS GKISKLLDPD LDSNYDDPQI ERMVLAATLC LRRAPRFRPQ IGLVLKLLLG DMEIIQWAKQ
701: QVSAMEGQEV EGESFPSNIQ SHLNLALLDL EDDSLSISST EQSISLEDYL QGRWSRSSSF A

Best Arabidopsis Sequence Match ( AT1G77280.1 )
(BLAST)

001: MIETGGDKQS SVEEGCGGRT ILVGVKLDAP SRELLTWALV KVAEPGDTVI ALHILGNEIV DRAGNSSLLS LVRTFDSVLD VYEGFCNLKQ VDLKLKLCRG
101: SSARKILVRE AKSFSATKVL VGISKSHHAI RSSASVAKYI AKKLSKDCWV IAVNNGKILF QKEGSPSSTI NQSQGKEDVR RITLLNVLQR SVTLNKTTKV
201: VSHSEEDSNS KEEEEDQACG QNLRQVLAAA RLENCSVCGF DSLSPNDTTT PGKLSGASDF DRSEDDDECN KAMEIVPVNG SEDSGGSVTM LVRKLPEPRP
301: GWPLLRRAVS TLGQSVTPHK IPVVQWALKL PPRDTKQLGY DSSEDNLSTL NALVPFGINS ITNKSIPDNS PRKLPEELEG LYERFSSTCR FFKYKELVSV
401: TSNFSADNFI GKGGSSRVFR GCLSNGRVVA VKILKQTEDV LNDFVAEIEI ITTLHHKNII SLLGFCFEDH NLLLVYNYLS RGSLEENLHG NKKDPLAFCW
501: SERYKVAVGV AEALDYLHNT ASQPVIHRDV KSSNILLSDD FEPQLSDFGL ARWASISTTH IICSDVAGTF GYLAPEYFMY GKVNDKIDVY AFGVVLLELL
601: SGRKPISSGC PKGQESLVMW AKPILDDGKY SQLLDPSLRD NNNNNDDQMQ RMALAATLCI RRSPQARPKM SIVLKLLKGD EDTLEWAMQQ VNSSSEESEM
701: LKDEQCQRSN LQSHLNLALL DVEDDSISMG SIEQGVSVED YLKGRTSRSS SFD

Arabidopsis Description

Protein kinase protein with adenine nucleotide alpha hydrolases-like domain [Source:TAIR;Acc:AT1G77280]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.