Factsheet for VIT_03s0038g03600.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g111950.2.1	Tomato	plastid	60.25	60.46
PGSC0003DMT400047943	Potato	plastid	59.54	59.86
Os03t0839700-00	Rice	cytosol	13.96	49.07
VIT_00s1291g00030.t01	Wine grape	cytosol	18.2	36.27
VIT_11s0052g00800.t01	Wine grape	mitochondrion	20.67	30.31
VIT_07s0104g00850.t01	Wine grape	cytosol, nucleus, plastid	22.44	29.26
VIT_14s0030g00390.t01	Wine grape	cytosol	21.55	28.84
VIT_05s0020g02230.t01	Wine grape	cytosol	24.2	28.13
VIT_00s0929g00020.t01	Wine grape	cytosol	23.5	27.37
VIT_18s0001g01680.t01	Wine grape	cytosol	35.34	26.35
VIT_04s0044g01560.t01	Wine grape	cytosol	34.63	25.76
VIT_03s0038g02400.t01	Wine grape	cytosol	30.57	25.4
VIT_14s0006g01420.t01	Wine grape	cytosol	22.44	24.47
VIT_11s0052g01810.t01	Wine grape	nucleus	24.91	23.42
TraesCS5B01G521500.1	Wheat	cytosol	30.57	21.52
VIT_18s0001g14690.t01	Wine grape	cytosol	28.62	21.29
Os03t0839900-02	Rice	nucleus	33.92	20.47
TraesCS4A01G351900.1	Wheat	nucleus	32.51	20.11
HORVU5Hr1G119060.5	Barley	nucleus	32.51	20.07
TraesCS5D01G520200.1	Wheat	nucleus	32.33	19.87
Zm00001d034788_P001	Maize	cytosol, mitochondrion, nucleus, plastid	31.8	19.63
Zm00001d012882_P001	Maize	cytosol, nucleus, plastid	26.5	19.51
EER90554	Sorghum	cytosol, mitochondrion, nucleus, plastid	32.16	19.26
VIT_00s0768g00040.t01	Wine grape	cytosol	7.6	17.48

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100243617	wikigene:100243617	Gene3D:3.30.200.20	MapMan:50.2.7	ProteinID:CCB60550
ProteinID:CCB60550.1	UniProt:F6I0T4	EMBL:FN596508	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100243617	wikigene:LOC100243617	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF155	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001982F00	ArrayExpress:VIT_03s0038g03600	EnsemblPlantsGene:VIT_03s0038g03600	EnsemblPlants:VIT_03s0038g03600.t01	RefSeq:XP_002279474
RefSeq:XP_002279474.1	RefSeq:XP_019073974.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:2591511..2593945

Molecular Weight (calculated)

63806.0 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.343

Length

566 amino acids

Sequence
(BLAST)

001: MLGRTRTERR IFGLRRSRTS KKRTIVFGLK SSNGSRGVLL KLLSSVVVTG DEVLAVHVQE PEPDDTFDLN TFHIHEDLCK SKQVDFHVKV CVGESYISEL
101: THQVRVSFAT ILALGCSSSR PDDSIVANCL KKLPPTCTLL VTDNGGRILI QRPGTSQQGS KTEVFQSTVS SSTTHMYLNR TGTPHHFRKS LTMPSPSTST
201: TTREADNNGQ KISKMTMQLP DFMEEKLFQR LALLEAKGLG KRFTSSELKL ATRDFSPEMV IGEGGHSKVY RANLGDGRLA AVKVLKPTRW YAEDLLQEVE
301: ILSDVNHENI VQIIGYCSNR EMHAVVYDLL KGSLKQKLRQ LRWKERMGVA IGVAKALEYL HHSCDPPIIH RDVKSSNVLL SENCHPQLSD FGSAMVYNRA
401: QQVSAKVKPL RVVGTFGYLA PEYMMYGKVD EKVDVYSYGV VLLELISGKE AIQTNQASNH ESLVLWARSL LSCGLCDRLI DPNLKDDYNK EEMKTMVVAA
501: RLCLMHSSSR RPTMKMILQL FEEPEYWLKM QRDREELLKG ISFKGETGQW RHDDLFTNDT LVADDT

Best Arabidopsis Sequence Match ( AT1G21590.1 )
(BLAST)

001: MTENGVVTGG GHTVMVGVKF DESSNELLDW ALVKVAEPGD TVIALHVLGN EIVDRADNSS LVSIVKNFDS VLEVYEGFCK LKQLELKLKL SRGSSTRKIL
101: VKEAKMCSAS KVVVGISRRF HTIHSSVSVA KYLARKVAKD CWVLAVDNGK VMFQKDGSSS IIHHSKGKSD ARRNTLSSFF QMPVTLRKNT KVVNHSEVEE
201: EEAEEDHSNG QSLRRSLVYA CLGNCSVRDM NSLPTPGNLS RSSSCNGDQD DNADLHKAMA LVPAKFPEDL TPFITMLVKE LPEFRPGWPL LCRVASSDVL
301: ASAPRSSSFR KIPVVQWVLK LPARTNSVVG SSDTKQIGFD SSESEENDKL SSSNVERQAI VPDESMIVKC SLDHSSGRFP ENVEGLQARI STSCQFFTYK
401: ELVSVTSNFC ADNFIGKGGS SRVFRGYLPN GREVAVKILK RTECVLKDFV AEIDIITTLH HKNVISLLGY CFENNNLLLV YNYLSRGSLE ENLHGNKKDL
501: VAFRWNERYK VAVGIAEALD YLHNDAPQPV IHRDVKSSNI LLSDDFEPQL SDFGLAKWAS ESTTQIICSD VAGTFGYLAP EYFMYGKMNN KIDVYAYGVV
601: LLELLSGRKP VNSESPKAQD SLVMWAKPIL DDKEYSQLLD SSLQDDNNSD QMEKMALAAT LCIRHNPQTR PTMGMVLELL KGDVEMLKWA KLQVSNPLED
701: SMLLKDEKLR RSNLQSHLNL AFLDMEDDSL SMGSMEQGIS VEEYLKGRTS RSSSFN

Arabidopsis Description

At1g21590/F24J8_9 [Source:UniProtKB/TrEMBL;Acc:Q8VZG4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.