CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012882_P001	Maize	cytosol, nucleus, plastid	71.43	87.78
Os03t0839700-00	Rice	cytosol	13.97	81.99
Zm00001d034788_P001	Maize	cytosol, mitochondrion, nucleus, plastid	79.05	81.46
Os03t0839900-02	Rice	nucleus	71.96	72.49
TraesCS5B01G521500.1	Wheat	cytosol	61.38	72.14
HORVU5Hr1G119060.5	Barley	nucleus	69.52	71.65
TraesCS5D01G520200.1	Wheat	nucleus	69.21	71.01
TraesCS4A01G351900.1	Wheat	nucleus	68.47	70.71
KXG27975	Sorghum	plastid	31.11	39.89
EER92574	Sorghum	cytosol	27.3	39.21
OQU78841	Sorghum	mitochondrion	28.57	34.79
EES11570	Sorghum	cytosol, mitochondrion	13.86	34.38
PGSC0003DMT400047943	Potato	plastid	19.47	32.68
Solyc01g111950.2.1	Tomato	plastid	19.47	32.62
VIT_03s0038g03600.t01	Wine grape	mitochondrion	19.26	32.16
EER88873	Sorghum	mitochondrion	13.44	31.91
KXG24831	Sorghum	cytosol	19.15	29.97
KXG20550	Sorghum	cytosol	16.3	26.83
KXG29017	Sorghum	plastid	14.6	26.69

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	Gene3D:3.30.200.20	UniProt:C5WT32	EnsemblPlants:EER90554	ProteinID:EER90554
ProteinID:EER90554.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF500	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	EnsemblPlantsGene:SORBI_3001G019400	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8255E	RefSeq:XP_002463556.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:1610923..1616733

Molecular Weight (calculated)

102499.0 Da

IEP (calculated)

5.884

GRAVY (calculated)

-0.378

Length

945 amino acids

Sequence
(BLAST)

001: MKVSSRKKQA PPQQSQQQRE EAEEQGLPAA GEAMDAAVQE AEAGCSGKAP VAEAGAEGRT VVVGVRAPAD AESRALLTWV LVNVAAPLDR VVAVHVAADA
101: AAVVDFEAMR GVYEGFCNLK QIDLKLKICK DSSVRKALVR EASLFGAAKV VLGVAKKRRA ISSSHSVAKY CAKKLPAKCA VLAVSNGKIE FRRESSVHSG
201: KVSAEVLPCG DDEMYCVVPF QARQAKGGTL SLQEPKGGGE GDTTRDVGTK GSELEDTIKD EQLVSSVVPA DLSTGQVEID ADPSSSKAEE PIVEQRDEIA
301: ELPGKGASVL YCVLPERRSD SVASTSSRQD HDSVDLPSEG AGELYCLLPP RNGHSVRSTG DSKRSNASKK DDKPVNPSLE GDGDLYCQLP RSGRPGRSSG
401: GSKRSVGIRG MIRRSSSFSS DIHLNSETSP SKKDGSVSMA TTERSSSTLS TEAEDSPKDT ARNAETPSSS PMSLRRMIEG RSDRCHLPRR IFRHRHHRRS
501: SSFEWAKTSM VQWAMRLPSR YTSVHPDGKS LKSDASPRLK CDSETGSTTA VEPVSMFSFA FYDIVWPPSE LESFREKYSS VCRLFSYDEL KLATANYSPD
601: MLIGKGGTSQ VFKAQLDDGT FSAIKILKPS VDAIHEFVTE IEIVSSLQHE NIVALRGFSF ENYNLVLAYD YMLQGSLDKA LHGKKDDTDF LIWERRIKIA
701: IDIARALEFL HLGGVTQSVI HGDVKSSNIL LSEDFGARLC DFGLAKRVSA STPHLTCTDI TGTFGYMAPE YFSYGKVNEK IDIYAFGVVL LEIISGRRPI
801: TQGSAKGQES LVGWAKPLLS SGEIKQLIDP FLGNNYDCDE MERMTLAASL CTRTSSHSRP EMSLVLKLLQ GDDETIGWAR AQVTASFDGS DEEATAAAPD
901: VNMQSYLNLA LLGVEEDDTL SHCSSTERTV DTSADGYWSR SSSFD

Best Arabidopsis Sequence Match ( AT1G77280.1 )
(BLAST)

001: MIETGGDKQS SVEEGCGGRT ILVGVKLDAP SRELLTWALV KVAEPGDTVI ALHILGNEIV DRAGNSSLLS LVRTFDSVLD VYEGFCNLKQ VDLKLKLCRG
101: SSARKILVRE AKSFSATKVL VGISKSHHAI RSSASVAKYI AKKLSKDCWV IAVNNGKILF QKEGSPSSTI NQSQGKEDVR RITLLNVLQR SVTLNKTTKV
201: VSHSEEDSNS KEEEEDQACG QNLRQVLAAA RLENCSVCGF DSLSPNDTTT PGKLSGASDF DRSEDDDECN KAMEIVPVNG SEDSGGSVTM LVRKLPEPRP
301: GWPLLRRAVS TLGQSVTPHK IPVVQWALKL PPRDTKQLGY DSSEDNLSTL NALVPFGINS ITNKSIPDNS PRKLPEELEG LYERFSSTCR FFKYKELVSV
401: TSNFSADNFI GKGGSSRVFR GCLSNGRVVA VKILKQTEDV LNDFVAEIEI ITTLHHKNII SLLGFCFEDH NLLLVYNYLS RGSLEENLHG NKKDPLAFCW
501: SERYKVAVGV AEALDYLHNT ASQPVIHRDV KSSNILLSDD FEPQLSDFGL ARWASISTTH IICSDVAGTF GYLAPEYFMY GKVNDKIDVY AFGVVLLELL
601: SGRKPISSGC PKGQESLVMW AKPILDDGKY SQLLDPSLRD NNNNNDDQMQ RMALAATLCI RRSPQARPKM SIVLKLLKGD EDTLEWAMQQ VNSSSEESEM
701: LKDEQCQRSN LQSHLNLALL DVEDDSISMG SIEQGVSVED YLKGRTSRSS SFD

Arabidopsis Description

Protein kinase protein with adenine nucleotide alpha hydrolases-like domain [Source:TAIR;Acc:AT1G77280]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.