CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002026_P001	Maize	mitochondrion	95.54	94.06
Os04t0654600-01	Rice	cytosol, mitochondrion	89.24	86.96
TraesCS2A01G504700.1	Wheat	cytosol, mitochondrion	85.3	84.64
TraesCS2B01G532900.1	Wheat	cytosol, mitochondrion	86.09	84.54
TraesCS2D01G505400.1	Wheat	cytosol, mitochondrion	86.35	83.5
GSMUA_Achr5P24180_001	Banana	mitochondrion	69.55	71.82
GSMUA_Achr10P...	Banana	mitochondrion	71.39	69.39
EER88873	Sorghum	mitochondrion	67.72	64.82
GSMUA_Achr5P21870_001	Banana	mitochondrion	66.14	62.07
KRH37271	Soybean	mitochondrion	60.1	61.73
KRH12238	Soybean	mitochondrion	60.1	61.73
VIT_11s0052g00800.t01	Wine grape	mitochondrion	62.47	61.66
GSMUA_Achr4P02180_001	Banana	plastid	66.4	61.26
KRH19036	Soybean	mitochondrion	58.79	58.95
GSMUA_Achr6P03860_001	Banana	cytosol	68.5	58.78
KRH02851	Soybean	mitochondrion	58.27	58.42
PGSC0003DMT400013990	Potato	mitochondrion	56.69	57.6
Solyc07g018140.2.1	Tomato	mitochondrion	56.43	56.88
Bra038555.1-P	Field mustard	mitochondrion	54.86	55.29
CDY49535	Canola	mitochondrion	55.38	55.09
CDY30299	Canola	mitochondrion	55.64	54.78
CDY52583	Canola	mitochondrion	55.38	54.52
CDY49301	Canola	mitochondrion	55.12	54.26
Bra038828.1-P	Field mustard	mitochondrion	54.59	53.75
AT2G18890.1	Thale cress	mitochondrion	54.59	53.06
CDY49158	Canola	cytosol	21.0	50.0
KXG24831	Sorghum	cytosol	49.87	31.46
KXG29017	Sorghum	plastid	41.47	30.56
KXG20550	Sorghum	cytosol	43.57	28.92
EER92574	Sorghum	cytosol	36.48	21.12
OQU78841	Sorghum	mitochondrion	38.32	18.81
KXG27975	Sorghum	plastid	34.91	18.05
EER90554	Sorghum	cytosol, mitochondrion, nucleus, plastid	34.38	13.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20	EntrezGene:8068505	UniProt:C5Y9G8
EnsemblPlants:EES11570	ProteinID:EES11570	ProteinID:EES11570.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF34	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3006G245600
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A871DD	RefSeq:XP_002447242.1	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:58519538..58525276

Molecular Weight (calculated)

42551.9 Da

IEP (calculated)

4.931

GRAVY (calculated)

-0.411

Length

381 amino acids

Sequence
(BLAST)

001: MNYLRSRSLK RLLSLGRRSN ADECAEECVD VDPPPNKPTW RCFSYEELDH ATNGFHKDNM VGKGGYGEVY RGVLDDGRAV AVKRLAPTAA ADEKKEKDFL
101: TELGTVGHVR HPNVSALLGC CVDRGLHLVF DFSTRGSVSA NLHDLKLPAM SWKQRHGIAV GTARGLRYLH KGCARRIIHR DIKASNILLT ADYEPQISDF
201: GLARWLPSEW THHAIAPIEG TFGCLAPEYF THGIVDEKTD VFAFGVFLLE LISGRKPVDG SHKSLIAWAK PYLSDGVVQG LVDPRLGDSY DAGQLRRLMF
301: VASLCVRAAA VWRPTMTQVL ELLESGEISQ DQWQMPEKEE QDELWDFDDL DDFEDDDDDN YDDESDSPSI SSSACSIHPN D

Best Arabidopsis Sequence Match ( AT2G18890.1 )
(BLAST)

001: MKYIRSNSLK RLFSFKRRSF DSDSSENSSP LAASSTKCVE GFQETDQFQR PKWKCFSFQE IYDATNGFSS ENLVGRGGFA EVYKGILGKN GEEIAVKRIT
101: RGGRDDERRE KEFLMEIGTI GHVSHPNVLS LLGCCIDNGL YLVFIFSSRG SLASLLHDLN QAPLEWETRY KIAIGTAKGL HYLHKGCQRR IIHRDIKSSN
201: VLLNQDFEPQ ISDFGLAKWL PSQWSHHSIA PIEGTFGHLA PEYYTHGIVD EKTDVFAFGV FLLELISGKK PVDASHQSLH SWAKLIIKDG EIEKLVDPRI
301: GEEFDLQQLH RIAFAASLCI RSSSLCRPSM IEVLEVLQGE DIEKEKWKME EEEEVKEEFW GYEDLEDCEC DSSISLSPPD SISNRSSSHR SR

Arabidopsis Description

At2g18890 [Source:UniProtKB/TrEMBL;Acc:O64619]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.