CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26785	Canola	mitochondrion, plastid	96.15	96.15
CDY71941	Canola	cytosol	71.15	88.36
CDY72015	Canola	cytosol	71.39	87.1
Bra037291.1-P	Field mustard	mitochondrion, plastid	97.12	78.6
CDX75481	Canola	cytosol	57.93	59.95
CDX69106	Canola	cytosol, plastid	68.27	58.56
AT2G16750.2	Thale cress	endoplasmic reticulum	83.89	56.56
VIT_03s0038g02400.t01	Wine grape	cytosol	56.97	34.8
CDY49535	Canola	mitochondrion	31.97	34.73
KRH29291	Soybean	cytosol, golgi, nucleus	54.33	34.4
CDY49301	Canola	mitochondrion	31.97	34.37
KRH24315	Soybean	cytosol	54.57	34.34
CDY52583	Canola	mitochondrion	31.73	34.11
CDY30299	Canola	mitochondrion	31.49	33.85
GSMUA_Achr11P...	Banana	cytosol	49.52	33.12
GSMUA_Achr1P02390_001	Banana	cytosol	48.56	32.37
PGSC0003DMT400015833	Potato	cytosol	53.12	32.12
CDY49158	Canola	cytosol	12.26	31.88
GSMUA_Achr5P18920_001	Banana	cytosol	45.43	31.87
Solyc01g111570.2.1	Tomato	cytosol	52.64	31.79
Os03t0241600-01	Rice	cytosol	49.76	31.75
CDY70924	Canola	cytosol	27.64	30.83
EER92574	Sorghum	cytosol	48.56	30.7
TraesCS4B01G228200.1	Wheat	cytosol	48.32	30.69
CDX96585	Canola	cytosol	9.86	30.6
GSMUA_Achr4P25730_001	Banana	cytosol	49.28	30.51
TraesCS4A01G072300.1	Wheat	cytosol	48.08	30.21
TraesCS4D01G229100.2	Wheat	cytosol	47.6	30.18
HORVU4Hr1G064010.3	Barley	cytosol	47.6	29.86
CDX96147	Canola	cytosol, plastid	33.89	29.75
CDY66762	Canola	cytosol, plastid	29.57	29.57
CDY55677	Canola	cytosol	33.65	29.54
CDY37641	Canola	cytosol	28.61	29.38
CDX74624	Canola	cytosol	28.37	29.14
Zm00001d028386_P001	Maize	cytosol	48.56	29.06
CDY41754	Canola	cytosol, plastid	28.61	28.95
CDY14578	Canola	cytosol	31.25	28.89
CDY08783	Canola	cytosol	31.49	28.73
CDY38355	Canola	cytosol	48.08	28.53
CDY37833	Canola	cytosol	31.73	28.27
CDY40878	Canola	cytosol, plastid	47.12	27.8
CDY40698	Canola	cytosol	29.09	26.95
CDX74151	Canola	cytosol	28.85	26.73
CDY38812	Canola	cytosol	44.95	26.56
CDY33949	Canola	cytosol	31.73	26.56
CDY40103	Canola	cytosol	30.53	26.51
CDX69825	Canola	cytosol	30.05	26.1
CDX88355	Canola	cytosol	44.23	26.03
CDX85756	Canola	cytosol	30.05	25.83
CDY43771	Canola	cytosol	42.07	25.77
CDY47188	Canola	cytosol, plastid	30.53	25.76
CDX97023	Canola	cytosol	30.29	25.66
CDY04652	Canola	cytosol	45.19	25.47
CDY71497	Canola	cytosol	19.71	25.39
CDY08194	Canola	cytosol	45.67	25.33
CDY39836	Canola	cytosol	41.35	25.33
CDY31344	Canola	cytosol	40.38	24.82
CDX84466	Canola	cytosol	41.59	24.68
CDY01702	Canola	plastid	31.73	24.67
CDY02597	Canola	cytosol, plastid	30.77	24.66
CDX87529	Canola	plasma membrane	43.75	24.5
CDY65404	Canola	cytosol, nucleus, plastid	31.73	24.49
CDX88908	Canola	cytosol, plastid	28.85	24.39
CDX74559	Canola	cytosol	31.49	24.3
CDY27793	Canola	cytosol	29.33	24.3
CDY41938	Canola	cytosol	29.33	24.3
CDX70854	Canola	cytosol, plastid	28.61	24.19
CDY49731	Canola	nucleus	31.49	22.59
CDX96584	Canola	cytosol, plasma membrane, plastid	25.48	19.96
CDY25891	Canola	cytosol	18.75	17.45
CDY38354	Canola	plasma membrane	17.31	13.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	Gene3D:3.30.200.20	GO:A0A078IBF4	UniProt:A0A078IBF4	EnsemblPlants:CDY47477
ProteinID:CDY47477	ProteinID:CDY47477.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00087530001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF44	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE28A1
SEG:seg	:	:	:	:	:

Description

BnaA09g08860DBnaA09g08860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBF4]

Coordinates

chrLK032718:+:66397..68062

Molecular Weight (calculated)

46576.1 Da

IEP (calculated)

4.757

GRAVY (calculated)

-0.294

Length

416 amino acids

Sequence
(BLAST)

001: MDQKPGWPLL RTTTLATPVV QHQTRKVSVV NWVMSLPERF PNLTSQQSFC DSQLKDILKE TNKWFSYDVL KTATSDFSSE NLIGKGGCNE VYKGVLEDGK
101: EVAVKILKSS GKEAVNDFIQ EVRIISSLSH QNISPLIGIC VHYNDLISVY NLSSRGSLEE ALQGKHVLGW EERFQIAIGL GKALDYLHNQ CSNPVIHRDV
201: KSSNVLLSDE FEPQLSDFGL SMWGSNSCGY TIQRDVLGTF GYLAPEYFMY GKVSDKVDVY AFGVVLFELI SGRTTISYDS PRGQESLVMW AIPMIEKGDA
301: RELLDPNISG SLEEAQFQKT VLAARCCLTR AATHRPNIRE ILKLLRGEDE VEKWVKKVEE DEDCFDDDEV YPNSNKDLHL SLAMLGIEDN DSVSVGSLER
401: SSRSIFSSSS SQELQS

Best Arabidopsis Sequence Match ( AT2G16750.2 )
(BLAST)

001: MAVDKVIVKQ RNIILVGIPI DESGVEVLKW ALEEVAKHGD CVVVVHVCFT YYRALKSKSS LDRYLKPYIE FCSTKKIELK GEVLKGNSVL GVLVKEAKRY
101: NAMSVVVGVK QQSKLSLKIA KGCAKELPST TDILAIHRGN IVFRRSNHYQ LPLAQKISSR PSSELSEGFS DKDLAKTTGQ EKRKISGRSL SLPSVEVVDQ
201: TPGWPLLRTS TLATPMVQHQ TRKISVVNWV MSLPERFPHH PNQTCQQSFC DKQLKDILKD INRWFSYDVL KTATSDFSLE NLIGKGGCNE VYKGFLEDGK
301: GVAVKILKPS VKEAVKEFVH EVSIVSSLSH SNISPLIGVC VHYNDLISVY NLSSKGSLEE TLQGKHVLRW EERLKIAIGL GEALDYLHNQ CSNPVIHRDV
401: KSSNVLLSDE FEPQLSDFGL SMWGSKSCRY TIQRDVVGTF GYLAPEYFMY GKVSDKVDVY AFGVVLLELI SGRTSISSDS PRGQESLVMW AKPMIEKGNA
501: KELLDPNIAG TFDEDQFHKM VLAATHCLTR AATYRPNIKE ILKLLRGEDD VSKWVKIEED DEDGFDDEVY PNSNTELHLS LAMVDVEDND SVSNSSLERS
601: NNSLFSSSSS SSQELQS

Arabidopsis Description

At2g16750 [Source:UniProtKB/TrEMBL;Acc:B5X4Z9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.