Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49158 | Canola | cytosol | 27.61 | 23.12 |
| CDY38812 | Canola | cytosol | 97.76 | 18.61 |
| CDY04652 | Canola | cytosol | 86.57 | 15.72 |
| CDY08194 | Canola | cytosol | 84.33 | 15.07 |
| CDY72015 | Canola | cytosol | 32.09 | 12.61 |
| CDY71941 | Canola | cytosol | 31.34 | 12.54 |
| CDY38355 | Canola | cytosol | 64.93 | 12.41 |
| CDY40878 | Canola | cytosol, plastid | 64.93 | 12.34 |
| CDX88355 | Canola | cytosol | 64.18 | 12.16 |
| CDX87529 | Canola | plasma membrane | 64.18 | 11.57 |
| CDY47477 | Canola | mitochondrion, plastid | 30.6 | 9.86 |
| CDY26785 | Canola | mitochondrion, plastid | 30.6 | 9.86 |
| CDY52583 | Canola | mitochondrion | 27.61 | 9.56 |
| CDY30299 | Canola | mitochondrion | 27.61 | 9.56 |
| CDY49301 | Canola | mitochondrion | 26.12 | 9.04 |
| CDY49535 | Canola | mitochondrion | 25.37 | 8.88 |
| CDY43771 | Canola | cytosol | 44.03 | 8.69 |
| CDY39836 | Canola | cytosol | 44.03 | 8.69 |
| CDY31344 | Canola | cytosol | 43.28 | 8.57 |
| CDX84466 | Canola | cytosol | 44.03 | 8.42 |
| CDX69106 | Canola | cytosol, plastid | 29.85 | 8.25 |
| CDX96147 | Canola | cytosol, plastid | 25.37 | 7.17 |
| CDY55677 | Canola | cytosol | 25.37 | 7.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 19.4 | 6.68 |
| CDY40698 | Canola | cytosol | 22.39 | 6.68 |
| CDX74151 | Canola | cytosol | 22.39 | 6.68 |
| GSMUA_Achr1P25900_001 | Banana | cytosol | 20.15 | 6.37 |
| CDY08783 | Canola | cytosol | 21.64 | 6.36 |
| CDY01702 | Canola | plastid | 25.37 | 6.36 |
| CDY65404 | Canola | cytosol, nucleus, plastid | 25.37 | 6.31 |
| CDX74559 | Canola | cytosol | 25.37 | 6.31 |
| CDY14578 | Canola | cytosol | 20.9 | 6.22 |
| CDY41938 | Canola | cytosol | 23.13 | 6.18 |
| CDX69825 | Canola | cytosol | 21.64 | 6.05 |
| CDY27793 | Canola | cytosol | 22.39 | 5.98 |
| CDX97023 | Canola | cytosol | 21.64 | 5.91 |
| CDY37833 | Canola | cytosol | 20.15 | 5.78 |
| CDY37641 | Canola | cytosol | 17.16 | 5.68 |
| CDX74624 | Canola | cytosol | 17.16 | 5.68 |
| CDY40103 | Canola | cytosol | 20.15 | 5.64 |
| CDX85756 | Canola | cytosol | 20.15 | 5.58 |
| CDY66762 | Canola | cytosol, plastid | 17.16 | 5.53 |
| CDY33949 | Canola | cytosol | 20.15 | 5.43 |
| CDY41754 | Canola | cytosol, plastid | 16.42 | 5.35 |
| CDY49731 | Canola | nucleus | 20.9 | 4.83 |
| CDY02597 | Canola | cytosol, plastid | 18.66 | 4.82 |
| CDY70924 | Canola | cytosol | 12.69 | 4.56 |
| CDY47188 | Canola | cytosol, plastid | 16.42 | 4.46 |
| CDX70854 | Canola | cytosol, plastid | 14.93 | 4.07 |
| CDX88908 | Canola | cytosol, plastid | 14.93 | 4.07 |
| CDX75481 | Canola | cytosol | 11.94 | 3.98 |
| CDX96584 | Canola | cytosol, plasma membrane, plastid | 5.22 | 1.32 |
| Solyc09g072510.1.1 | Tomato | cytosol | 1.49 | 0.99 |
| CDY25891 | Canola | cytosol | 2.99 | 0.89 |
| CDY71497 | Canola | cytosol | 0.0 | 0.0 |
| CDY38354 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX96585 | EnsemblPlantsGene:GSBRNA2T00102782001 | Gene3D:1.10.510.10 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF508 | ProteinID:CDX96585 |
| ProteinID:CDX96585.1 | SEG:seg | UniParc:UPI0004EF2AF5 | MapMan:35.2 | : | : |
Description
BnaA08g21280D
Coordinates
chrLK031895:+:133187..134019
Molecular Weight (calculated)
15344.3 Da
IEP (calculated)
4.997
GRAVY (calculated)
-0.623
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MWAKPILDDR DYSQLLDQSL VNHNNGDQME RMALAATLCI RHNPQSRPEM GMVLNLLKGD VEMLKWAKEQ VSSGLEDSKL LKDEKLKRSN LQSHLNVAFL
101: DMEDEESISM RSMVQGISVE DYLKGRESRS SSFN
101: DMEDEESISM RSMVQGISVE DYLKGRESRS SSFN
001: MTENGVVTGG GHTVMVGVKF DESSNELLDW ALVKVAEPGD TVIALHVLGN EIVDRADNSS LVSIVKNFDS VLEVYEGFCK LKQLELKLKL SRGSSTRKIL
101: VKEAKMCSAS KVVVGISRRF HTIHSSVSVA KYLARKVAKD CWVLAVDNGK VMFQKDGSSS IIHHSKGKSD ARRNTLSSFF QMPVTLRKNT KVVNHSEVEE
201: EEAEEDHSNG QSLRRSLVYA CLGNCSVRDM NSLPTPGNLS RSSSCNGDQD DNADLHKAMA LVPAKFPEDL TPFITMLVKE LPEFRPGWPL LCRVASSDVL
301: ASAPRSSSFR KIPVVQWVLK LPARTNSVVG SSDTKQIGFD SSESEENDKL SSSNVERQAI VPDESMIVKC SLDHSSGRFP ENVEGLQARI STSCQFFTYK
401: ELVSVTSNFC ADNFIGKGGS SRVFRGYLPN GREVAVKILK RTECVLKDFV AEIDIITTLH HKNVISLLGY CFENNNLLLV YNYLSRGSLE ENLHGNKKDL
501: VAFRWNERYK VAVGIAEALD YLHNDAPQPV IHRDVKSSNI LLSDDFEPQL SDFGLAKWAS ESTTQIICSD VAGTFGYLAP EYFMYGKMNN KIDVYAYGVV
601: LLELLSGRKP VNSESPKAQD SLVMWAKPIL DDKEYSQLLD SSLQDDNNSD QMEKMALAAT LCIRHNPQTR PTMGMVLELL KGDVEMLKWA KLQVSNPLED
701: SMLLKDEKLR RSNLQSHLNL AFLDMEDDSL SMGSMEQGIS VEEYLKGRTS RSSSFN
101: VKEAKMCSAS KVVVGISRRF HTIHSSVSVA KYLARKVAKD CWVLAVDNGK VMFQKDGSSS IIHHSKGKSD ARRNTLSSFF QMPVTLRKNT KVVNHSEVEE
201: EEAEEDHSNG QSLRRSLVYA CLGNCSVRDM NSLPTPGNLS RSSSCNGDQD DNADLHKAMA LVPAKFPEDL TPFITMLVKE LPEFRPGWPL LCRVASSDVL
301: ASAPRSSSFR KIPVVQWVLK LPARTNSVVG SSDTKQIGFD SSESEENDKL SSSNVERQAI VPDESMIVKC SLDHSSGRFP ENVEGLQARI STSCQFFTYK
401: ELVSVTSNFC ADNFIGKGGS SRVFRGYLPN GREVAVKILK RTECVLKDFV AEIDIITTLH HKNVISLLGY CFENNNLLLV YNYLSRGSLE ENLHGNKKDL
501: VAFRWNERYK VAVGIAEALD YLHNDAPQPV IHRDVKSSNI LLSDDFEPQL SDFGLAKWAS ESTTQIICSD VAGTFGYLAP EYFMYGKMNN KIDVYAYGVV
601: LLELLSGRKP VNSESPKAQD SLVMWAKPIL DDKEYSQLLD SSLQDDNNSD QMEKMALAAT LCIRHNPQTR PTMGMVLELL KGDVEMLKWA KLQVSNPLED
701: SMLLKDEKLR RSNLQSHLNL AFLDMEDDSL SMGSMEQGIS VEEYLKGRTS RSSSFN
Arabidopsis Description
At1g21590/F24J8_9 [Source:UniProtKB/TrEMBL;Acc:Q8VZG4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.