Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85756 | Canola | cytosol | 94.36 | 93.39 |
| Bra028581.1-P | Field mustard | cytosol | 75.37 | 90.93 |
| AT5G10520.1 | Thale cress | cytosol | 81.21 | 83.3 |
| CDX69825 | Canola | cytosol | 82.88 | 82.88 |
| CDX97023 | Canola | cytosol | 82.88 | 80.86 |
| CDY08783 | Canola | cytosol | 69.1 | 72.59 |
| CDY71497 | Canola | cytosol | 48.64 | 72.14 |
| CDY14578 | Canola | cytosol | 67.64 | 72.0 |
| CDY37833 | Canola | cytosol | 68.68 | 70.45 |
| CDY33949 | Canola | cytosol | 70.56 | 68.01 |
| VIT_00s1291g00030.t01 | Wine grape | cytosol | 37.58 | 63.38 |
| KRH74475 | Soybean | cytosol | 41.13 | 63.34 |
| Solyc04g014410.2.1 | Tomato | cytosol, mitochondrion | 40.5 | 60.81 |
| PGSC0003DMT400041603 | Potato | cytosol | 55.53 | 52.99 |
| KRH39471 | Soybean | cytosol | 50.1 | 52.98 |
| Solyc11g010730.1.1 | Tomato | cytosol | 55.53 | 52.78 |
| VIT_00s0929g00020.t01 | Wine grape | cytosol | 53.24 | 52.47 |
| KRH45545 | Soybean | cytosol | 51.98 | 52.2 |
| PGSC0003DMT400060605 | Potato | cytosol | 51.36 | 51.9 |
| KRG99478 | Soybean | cytosol | 51.98 | 51.45 |
| Zm00001d047798_P001 | Maize | cytosol | 14.2 | 48.23 |
| CDY70924 | Canola | cytosol | 37.16 | 47.72 |
| Zm00001d018955_P001 | Maize | cytosol | 15.45 | 45.96 |
| CDY37641 | Canola | cytosol | 38.62 | 45.68 |
| CDX74624 | Canola | cytosol | 38.41 | 45.43 |
| GSMUA_Achr2P02460_001 | Banana | cytosol | 49.69 | 45.42 |
| CDY41754 | Canola | cytosol, plastid | 38.2 | 44.53 |
| VIT_00s0768g00040.t01 | Wine grape | cytosol | 22.76 | 44.31 |
| CDY66762 | Canola | cytosol, plastid | 38.41 | 44.23 |
| TraesCS7D01G471700.1 | Wheat | cytosol | 46.56 | 41.37 |
| TraesCS7A01G484300.1 | Wheat | cytosol | 46.14 | 41.08 |
| CDX74151 | Canola | cytosol | 38.0 | 40.53 |
| KXG20550 | Sorghum | cytosol | 48.43 | 40.42 |
| Os06t0663900-03 | Rice | cytosol | 46.76 | 40.36 |
| CDY40698 | Canola | cytosol | 37.79 | 40.31 |
| Zm00001d046941_P001 | Maize | cytosol | 47.81 | 40.18 |
| CDY49535 | Canola | mitochondrion | 31.32 | 39.16 |
| CDY49301 | Canola | mitochondrion | 31.32 | 38.76 |
| TraesCS7B01G388000.3 | Wheat | mitochondrion | 46.76 | 38.62 |
| HORVU7Hr1G109290.2 | Barley | cytosol | 46.14 | 38.5 |
| CDY52583 | Canola | mitochondrion | 30.9 | 38.24 |
| CDY30299 | Canola | mitochondrion | 30.69 | 37.98 |
| CDY27793 | Canola | cytosol | 39.46 | 37.65 |
| CDY41938 | Canola | cytosol | 39.46 | 37.65 |
| CDX70854 | Canola | cytosol, plastid | 37.16 | 36.18 |
| CDX88908 | Canola | cytosol, plastid | 37.16 | 36.18 |
| CDY47188 | Canola | cytosol, plastid | 36.95 | 35.9 |
| CDY71941 | Canola | cytosol | 24.84 | 35.52 |
| CDY72015 | Canola | cytosol | 25.05 | 35.19 |
| CDY02597 | Canola | cytosol, plastid | 38.0 | 35.07 |
| CDY26785 | Canola | mitochondrion, plastid | 26.93 | 31.01 |
| CDY49158 | Canola | cytosol | 10.23 | 30.62 |
| CDX75481 | Canola | cytosol | 25.68 | 30.6 |
| CDY47477 | Canola | mitochondrion, plastid | 26.51 | 30.53 |
| CDY49731 | Canola | nucleus | 35.28 | 29.14 |
| CDX69106 | Canola | cytosol, plastid | 27.77 | 27.42 |
| Zm00001d040679_P001 | Maize | plastid | 20.25 | 27.17 |
| CDY55677 | Canola | cytosol | 25.26 | 25.53 |
| CDX96147 | Canola | cytosol, plastid | 25.26 | 25.53 |
| CDY01702 | Canola | plastid | 26.51 | 23.74 |
| CDX74559 | Canola | cytosol | 26.1 | 23.19 |
| CDY65404 | Canola | cytosol, nucleus, plastid | 26.1 | 23.19 |
| CDY25891 | Canola | cytosol | 20.88 | 22.37 |
| CDY38812 | Canola | cytosol | 29.65 | 20.17 |
| CDX96585 | Canola | cytosol | 5.64 | 20.15 |
| CDY31344 | Canola | cytosol | 28.39 | 20.09 |
| CDY43771 | Canola | cytosol | 28.18 | 19.88 |
| CDY39836 | Canola | cytosol | 28.18 | 19.88 |
| CDY38355 | Canola | cytosol | 29.02 | 19.83 |
| CDY04652 | Canola | cytosol | 30.48 | 19.78 |
| CDX84466 | Canola | cytosol | 28.39 | 19.4 |
| CDY08194 | Canola | cytosol | 30.27 | 19.33 |
| CDY40878 | Canola | cytosol, plastid | 28.39 | 19.29 |
| CDX88355 | Canola | cytosol | 28.18 | 19.09 |
| CDX87529 | Canola | plasma membrane | 27.77 | 17.9 |
| CDX96584 | Canola | cytosol, plasma membrane, plastid | 19.83 | 17.89 |
| CDY38354 | Canola | plasma membrane | 11.06 | 9.81 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.36 | MapMan:27.4.7 | Gene3D:3.30.200.20 | GO:A0A078HTN2 | UniProt:A0A078HTN2 |
| EnsemblPlants:CDY40103 | ProteinID:CDY40103 | ProteinID:CDY40103.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00069023001 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF105 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE75F6 | SEG:seg | : | : |
Description
BnaC02g00270DBnaC02g00270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTN2]
Coordinates
chrLK032463:-:208165..210201
Molecular Weight (calculated)
53609.5 Da
IEP (calculated)
6.038
GRAVY (calculated)
-0.400
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEEGKLAT ETEKNRESNE HQEIELHRND LGLEDSSSPR GVLGITAMAS DTDNNNSSSY SSCSSCSSDD KSSSTSLSPV SNTPNKNVSS SSNGLHWTKM
101: IESIKKKSFR RFTVIPFLAS YQLTRKNLRC KQPILSPSEN SFFMAKPSWR NFTYEELAAA TEDFNPENMI GKGGHAEVYK GVLPDGETVA IKKVMSHNKK
201: EDERVSDFLS ELGIIAHVNH TNAAKLLGFS IDRGLHFVLE YSPHGSLANM LFGTEECLEW KIRYKVALGI ADGLSYLHND CPRRIIHRDI KASNILLSRD
301: YDAQISDFGL AKWLPENWLH HVVSPIEGTF GYMAPEYFIH GIVDEKIDVF AFGVLLLEII TGRRAVDTAN KQSIVAWAKP FLGKNSVEDI VDPRLGNEID
401: VTEMKRVMLT ASTCIHHIAT MRPDMTMLVQ LLRGEEGPDE LQQKPGERAE VSVNACDVQD HTSSSYLNEL TRHRQLLME
101: IESIKKKSFR RFTVIPFLAS YQLTRKNLRC KQPILSPSEN SFFMAKPSWR NFTYEELAAA TEDFNPENMI GKGGHAEVYK GVLPDGETVA IKKVMSHNKK
201: EDERVSDFLS ELGIIAHVNH TNAAKLLGFS IDRGLHFVLE YSPHGSLANM LFGTEECLEW KIRYKVALGI ADGLSYLHND CPRRIIHRDI KASNILLSRD
301: YDAQISDFGL AKWLPENWLH HVVSPIEGTF GYMAPEYFIH GIVDEKIDVF AFGVLLLEII TGRRAVDTAN KQSIVAWAKP FLGKNSVEDI VDPRLGNEID
401: VTEMKRVMLT ASTCIHHIAT MRPDMTMLVQ LLRGEEGPDE LQQKPGERAE VSVNACDVQD HTSSSYLNEL TRHRQLLME
001: MAVEDNKNSE SKNHQEVELH RNDLGLEDSS SPRGVLGMVS DSDNSSSSCS SCSSDDKSSS TSSPFSNTTK TVSSSHHGLQ WNKMIESIKK KSMRRFSVIP
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
Arabidopsis Description
RBK1RBK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.