Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69825 | Canola | cytosol | 86.51 | 84.34 |
| Bra009025.1-P | Field mustard | cytosol | 86.08 | 83.92 |
| CDX97023 | Canola | cytosol | 86.51 | 82.28 |
| CDY40103 | Canola | cytosol | 83.3 | 81.21 |
| CDX85756 | Canola | cytosol | 84.15 | 81.2 |
| AT5G65530.1 | Thale cress | cytosol | 76.66 | 78.51 |
| Bra028581.1-P | Field mustard | cytosol | 66.38 | 78.09 |
| VIT_00s1291g00030.t01 | Wine grape | cytosol | 40.04 | 65.85 |
| KRH74475 | Soybean | cytosol | 43.47 | 65.27 |
| Solyc04g014410.2.1 | Tomato | cytosol, mitochondrion | 41.33 | 60.5 |
| KRH45545 | Soybean | cytosol | 56.1 | 54.93 |
| KRH39471 | Soybean | cytosol | 52.89 | 54.53 |
| KRG99478 | Soybean | cytosol | 56.1 | 54.13 |
| VIT_00s0929g00020.t01 | Wine grape | cytosol | 56.32 | 54.12 |
| PGSC0003DMT400060605 | Potato | cytosol | 54.6 | 53.8 |
| PGSC0003DMT400041603 | Potato | cytosol | 57.17 | 53.19 |
| Solyc11g010730.1.1 | Tomato | cytosol | 57.39 | 53.17 |
| Zm00001d047798_P001 | Maize | cytosol | 14.35 | 47.52 |
| VIT_00s0768g00040.t01 | Wine grape | cytosol | 24.41 | 46.34 |
| GSMUA_Achr2P02460_001 | Banana | cytosol | 51.82 | 46.18 |
| Zm00001d018955_P001 | Maize | cytosol | 15.2 | 44.1 |
| AT5G35960.1 | Thale cress | plasma membrane, vacuole | 39.19 | 42.66 |
| TraesCS7D01G471700.1 | Wheat | cytosol | 48.61 | 42.12 |
| TraesCS7A01G484300.1 | Wheat | cytosol | 48.18 | 41.82 |
| Os06t0663900-03 | Rice | cytosol | 48.82 | 41.08 |
| KXG20550 | Sorghum | cytosol | 49.04 | 39.9 |
| Zm00001d046941_P001 | Maize | cytosol | 48.61 | 39.82 |
| AT2G18890.1 | Thale cress | mitochondrion | 33.19 | 39.54 |
| HORVU7Hr1G109290.2 | Barley | cytosol | 48.18 | 39.2 |
| TraesCS7B01G388000.3 | Wheat | mitochondrion | 48.61 | 39.14 |
| AT5G18910.1 | Thale cress | cytosol, plastid | 41.11 | 37.57 |
| AT3G05140.2 | Thale cress | cytosol | 40.47 | 37.2 |
| AT4G35030.5 | Thale cress | cytosol | 28.05 | 29.24 |
| AT5G57670.2 | Thale cress | cytosol | 35.12 | 28.32 |
| AT1G66460.3 | Thale cress | nucleus | 28.05 | 26.52 |
| Zm00001d040679_P001 | Maize | plastid | 19.7 | 25.77 |
| AT2G16750.2 | Thale cress | endoplasmic reticulum | 29.76 | 22.53 |
| AT5G37790.1 | Thale cress | cytosol | 26.34 | 22.28 |
| AT5G63940.1 | Thale cress | cytosol | 29.34 | 19.43 |
| AT1G21590.1 | Thale cress | cytosol | 31.26 | 19.31 |
| AT1G77280.2 | Thale cress | cytosol | 30.84 | 19.12 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.36 | MapMan:27.4.7 | Gene3D:3.30.200.20 | EntrezGene:830917 | UniProt:A0A178UTT7 |
| ProteinID:AED91559.1 | ArrayExpress:AT5G10520 | EnsemblPlantsGene:AT5G10520 | RefSeq:AT5G10520 | TAIR:AT5G10520 | RefSeq:AT5G10520-TAIR-G |
| EnsemblPlants:AT5G10520.1 | TAIR:AT5G10520.1 | EMBL:AY056156 | EMBL:AY150507 | ProteinID:CAB89391.1 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004675 |
| GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007166 | GO:GO:0007178 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009623 | GO:GO:0009719 |
| GO:GO:0009814 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0038023 | GO:GO:0051020 | GO:GO:0071369 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_568231.1 | ProteinID:OAO96262.1 | PFAM:PF00069 | PO:PO:0000263 | PO:PO:0000282 |
| PO:PO:0000293 | PO:PO:0005645 | PO:PO:0009005 | PO:PO:0009015 | PO:PO:0020094 | PO:PO:0025195 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF105 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | UniProt:Q8H1D6 | Symbol:RBK1 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI00000ADA9D | SEG:seg | : | : | : | : |
Description
RBK1RBK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTT7]
Coordinates
chr5:-:3319870..3322910
Molecular Weight (calculated)
52654.7 Da
IEP (calculated)
6.732
GRAVY (calculated)
-0.394
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEDNKNSE SKNHQEVELH RNDLGLEDSS SPRGVLGMVS DSDNSSSSCS SCSSDDKSSS TSSPFSNTTK TVSSSHHGLQ WNKMIESIKK KSMRRFSVIP
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
101: LLASYELTRK NLRRKQPKLT PSESAFTCEA FFMAKPSWRN FTYEELAVAT DYFNPENMIG KGGHAEVYKG VLINGETVAI KKLMSHAKEE EERVSDFLSE
201: LGIIAHVNHP NAARLRGFSS DRGLHFVLEY APYGSLASML FGSEECLEWK IRYKVALGIA DGLSYLHNAC PRRIIHRDIK ASNILLNHDY EAQISDFGLA
301: KWLPENWPHH VVFPIEGTFG YLAPEYFMHG IVDEKIDVFA FGVLLLEIIT SRRAVDTASR QSIVAWAKPF LEKNSMEDIV DPRLGNMFNP TEMQRVMLTA
401: SMCVHHIAAM RPDMTRLVQL LRGEDGPAEL QQKAGERTMS VNACDLQDHT SSSYLNELRR HRQLLME
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.