Factsheet for AT5G18910.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47188	Canola	cytosol, plastid	82.78	85.8
CDX88908	Canola	cytosol, plastid	82.58	85.77
Bra023698.1-P	Field mustard	cytosol, plastid	82.58	85.6
CDX70854	Canola	cytosol, plastid	82.0	85.16
CDY02597	Canola	cytosol, plastid	85.13	83.81
Bra006483.1-P	Field mustard	cytosol, plastid	78.67	79.92
KRH11304	Soybean	cytosol, nucleus, vacuole	27.01	70.77
KRH20962	Soybean	plasma membrane	61.64	61.28
VIT_05s0020g02230.t01	Wine grape	cytosol	54.21	56.88
GSMUA_AchrUn_...	Banana	mitochondrion	41.68	54.76
GSMUA_Achr1P25900_001	Banana	cytosol	42.07	50.71
AT5G35960.1	Thale cress	plasma membrane, vacuole	40.9	48.72
PGSC0003DMT400081750	Potato	cytosol	45.79	48.25
Solyc01g080520.2.1	Tomato	cytosol	45.21	47.63
AT3G05140.2	Thale cress	cytosol	46.58	46.85
Solyc06g054480.2.1	Tomato	cytosol	45.4	45.49
AT5G65530.1	Thale cress	cytosol	40.51	45.39
PGSC0003DMT400079113	Potato	cytosol	45.21	45.29
AT2G18890.1	Thale cress	mitochondrion	33.07	43.11
AT5G10520.1	Thale cress	cytosol	37.57	41.11
AT5G57670.2	Thale cress	cytosol	35.23	31.09
AT4G35030.5	Thale cress	cytosol	26.03	29.69
AT1G66460.3	Thale cress	nucleus	25.44	26.32
AT5G37790.1	Thale cress	cytosol	25.44	23.55
AT2G16750.2	Thale cress	endoplasmic reticulum	27.2	22.53
AT5G63940.1	Thale cress	cytosol	28.18	20.43
AT1G77280.2	Thale cress	cytosol	29.35	19.92
AT1G21590.1	Thale cress	cytosol	28.77	19.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20	EntrezGene:832009	ProteinID:AED92627.1
EMBL:AK117950	ArrayExpress:AT5G18910	EnsemblPlantsGene:AT5G18910	RefSeq:AT5G18910	TAIR:AT5G18910	RefSeq:AT5G18910-TAIR-G
EnsemblPlants:AT5G18910.1	TAIR:AT5G18910.1	EMBL:BT005900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	GO:GO:0046777	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_197392.2	PFAM:PF07714	PO:PO:0001016	PO:PO:0001017	PO:PO:0001185	PO:PO:0007611
PO:PO:0007616	PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF284	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q8GXZ5
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000060D9A	SEG:seg

Description

At5g18910 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ5]

Coordinates

chr5:-:6306599..6309578

Molecular Weight (calculated)

57951.4 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.533

Length

511 amino acids

Sequence
(BLAST)

001: MEGLRDSSSQ TISSTTSSSS SPSCDVDVDN RGKQLTPSTR RSRAGFSDSF SSHDLSSFCR DEEVKTFCPI KSESDDELLR SIEAETSSSV VSTSDSSETH
101: HHHHHHHSSG GPNNGHWRRG FFRLLKKGSS AMPFNTFTPL KGVPKLTRRK SKRIRDNMVP VIPALDTDHL FYFKPSWRNF SLRDIQTATN DYSRENLIGE
201: GGYAEVYKGQ MADGQIVAIK KLTRGSAEEM TMDYLSELGI IVHVDHPNIA KLIGYCVEGG MHLVLELSPN GSLASLLYEA KEKLNWSMRY KVAMGTAEGL
301: YYLHEGCQRR IIHKDIKASN ILLTQNFEAQ ISDFGLAKWL PDQWTHHTVS KVEGTFGYLP PEFFMHGIVD EKTDVYAYGV LLLELITGRQ ALDSSQHSIV
401: MWAKPLIKEN KIKQLVDPIL EDDYDVEELD RLVFIASLCI HQTSMNRPQM SQVVEILRGD KCSLDKLRER ENSKLQRTYS EELLDNEEYN STRYLNDINR
501: HMETVLGTSK D

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.