Factsheet for PGSC0003DMT400079113

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g054480.2.1	Tomato	cytosol	97.06	97.06
PGSC0003DMT400081750	Potato	cytosol	65.29	68.66
KRH11304	Soybean	cytosol, nucleus, vacuole	19.61	51.28
VIT_05s0020g02230.t01	Wine grape	cytosol	48.04	50.31
GSMUA_AchrUn_...	Banana	mitochondrion	38.24	50.13
PGSC0003DMT400009745	Potato	cytosol	40.98	47.5
GSMUA_Achr1P25900_001	Banana	cytosol	38.63	46.46
KRH20962	Soybean	plasma membrane	46.67	46.3
Bra023698.1-P	Field mustard	cytosol, plastid	44.12	45.64
CDY47188	Canola	cytosol, plastid	43.73	45.23
AT5G18910.1	Thale cress	cytosol, plastid	45.29	45.21
CDX70854	Canola	cytosol, plastid	43.14	44.72
CDX88908	Canola	cytosol, plastid	43.14	44.72
CDY02597	Canola	cytosol, plastid	45.29	44.51
Bra006483.1-P	Field mustard	cytosol, plastid	39.61	40.16
PGSC0003DMT400013990	Potato	mitochondrion	28.43	38.67
PGSC0003DMT400041603	Potato	cytosol	36.47	37.05
PGSC0003DMT400060605	Potato	cytosol	34.12	36.71
PGSC0003DMT400070634	Potato	cytosol	31.37	26.02
PGSC0003DMT400078652	Potato	cytosol	23.73	23.4
PGSC0003DMT400026989	Potato	cytosol	23.92	23.37
PGSC0003DMT400015833	Potato	cytosol	29.02	21.51
PGSC0003DMT400047943	Potato	plastid	23.73	21.49
PGSC0003DMT400065131	Potato	cytosol	28.43	20.54
PGSC0003DMT400017573	Potato	cytosol	28.82	20.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D195	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400030789	PGSC:PGSC0003DMG400030789
EnsemblPlants:PGSC0003DMT400079113	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF284
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295AA0C
SEG:seg	:	:	:	:	:

Description

Kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030789]

Coordinates

chr6:+:40815658..40819688

Molecular Weight (calculated)

56672.4 Da

IEP (calculated)

6.464

GRAVY (calculated)

-0.435

Length

510 amino acids

Sequence
(BLAST)

001: MKTTREPFAA PCENPSNGIT GKGLSKVGQN TLLFCASISI SAEELRCLTV GEGKIEKDST EEPLDKVQSR DDVAEESIRD ASEDDAESTT SKSSNTSDSD
101: GKFQSQWKGF IKRLKISSAM HLHTFHPSIP SLPSIKMLPK WKSRSTEQSI PMAPSSNLDA DLRHCFQAHW KNFPLSDLQK ATGNFSRENL IGEGGSSEVY
201: KGHLKDGQLV AVKRLIRGTQ EEMTADYLSE LGILVHVNHP NISGVIGYGV EGGMHLVLPL SPHGSLANLL NGEKGKLSWC YRYNISLGTA AGLGYLHEGC
301: RRRIIHRDIK TANVLLTEDF EAQISDFGLA KWLPDQWTHL TVSQFEGTFG YLPPEFFMHG VVDEKTDVYA FGVLLLELIS GRAALDESRN SVVMWAKPML
401: LSKNHSGLVD PSLGDAYDSE QMNRMVMVAS LCIQQASTDR PQMSQVHEML KGTRSILERK KTFQHTNRQD DISQKVNLLL DMPSPKCKDD PNYQQSLAEL
501: EKYNVNSLLQ

Best Arabidopsis Sequence Match ( AT5G18910.1 )
(BLAST)

001: MEGLRDSSSQ TISSTTSSSS SPSCDVDVDN RGKQLTPSTR RSRAGFSDSF SSHDLSSFCR DEEVKTFCPI KSESDDELLR SIEAETSSSV VSTSDSSETH
101: HHHHHHHSSG GPNNGHWRRG FFRLLKKGSS AMPFNTFTPL KGVPKLTRRK SKRIRDNMVP VIPALDTDHL FYFKPSWRNF SLRDIQTATN DYSRENLIGE
201: GGYAEVYKGQ MADGQIVAIK KLTRGSAEEM TMDYLSELGI IVHVDHPNIA KLIGYCVEGG MHLVLELSPN GSLASLLYEA KEKLNWSMRY KVAMGTAEGL
301: YYLHEGCQRR IIHKDIKASN ILLTQNFEAQ ISDFGLAKWL PDQWTHHTVS KVEGTFGYLP PEFFMHGIVD EKTDVYAYGV LLLELITGRQ ALDSSQHSIV
401: MWAKPLIKEN KIKQLVDPIL EDDYDVEELD RLVFIASLCI HQTSMNRPQM SQVVEILRGD KCSLDKLRER ENSKLQRTYS EELLDNEEYN STRYLNDINR
501: HMETVLGTSK D

Arabidopsis Description

At5g18910 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.