CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88908	Canola	cytosol, plastid	98.78	98.78
Bra006483.1-P	Field mustard	cytosol, plastid	95.12	93.04
CDY47188	Canola	cytosol, plastid	83.94	83.77
AT5G18910.1	Thale cress	cytosol, plastid	85.16	82.0
CDY02597	Canola	cytosol, plastid	83.94	79.58
KRH11304	Soybean	cytosol, nucleus, vacuole	25.0	63.08
KRH20962	Soybean	plasma membrane	60.57	57.98
VIT_05s0020g02230.t01	Wine grape	cytosol	54.88	55.44
GSMUA_AchrUn_...	Banana	mitochondrion	41.46	52.44
CDY70924	Canola	cytosol	37.4	49.33
CDY37641	Canola	cytosol	39.23	47.65
GSMUA_Achr1P25900_001	Banana	cytosol	41.06	47.64
CDX74624	Canola	cytosol	39.02	47.41
PGSC0003DMT400081750	Potato	cytosol	45.94	46.6
CDY66762	Canola	cytosol, plastid	39.23	46.39
CDX74151	Canola	cytosol	42.28	46.33
CDY40698	Canola	cytosol	42.28	46.33
CDY41754	Canola	cytosol, plastid	38.62	46.23
Solyc01g080520.2.1	Tomato	cytosol	45.33	45.98
CDY41938	Canola	cytosol	45.73	44.82
CDY27793	Canola	cytosol	45.33	44.42
PGSC0003DMT400079113	Potato	cytosol	44.72	43.14
Solyc06g054480.2.1	Tomato	cytosol	44.72	43.14
CDY52583	Canola	mitochondrion	32.72	41.6
CDY49301	Canola	mitochondrion	32.52	41.34
CDY30299	Canola	mitochondrion	32.52	41.34
CDY49535	Canola	mitochondrion	32.11	41.25
CDY08783	Canola	cytosol	38.21	41.23
CDY14578	Canola	cytosol	37.6	41.11
CDY71497	Canola	cytosol	26.22	39.94
CDY37833	Canola	cytosol	37.4	39.4
CDY33949	Canola	cytosol	38.01	37.63
CDY40103	Canola	cytosol	36.18	37.16
CDX85756	Canola	cytosol	36.38	36.98
CDX69825	Canola	cytosol	35.57	36.53
CDX97023	Canola	cytosol	35.77	35.85
CDY71941	Canola	cytosol	23.17	34.03
CDY72015	Canola	cytosol	23.58	34.02
CDY49158	Canola	cytosol	10.77	33.12
CDX75481	Canola	cytosol	23.98	29.35
CDY26785	Canola	mitochondrion, plastid	24.59	29.09
CDY47477	Canola	mitochondrion, plastid	24.19	28.61
CDY49731	Canola	nucleus	32.93	27.93
CDX69106	Canola	cytosol, plastid	25.2	25.57
CDX96147	Canola	cytosol, plastid	24.39	25.32
CDY55677	Canola	cytosol	24.19	25.11
CDY25891	Canola	cytosol	22.15	24.38
CDY01702	Canola	plastid	23.98	22.06
CDY65404	Canola	cytosol, nucleus, plastid	23.98	21.89
CDX74559	Canola	cytosol	23.98	21.89
CDY43771	Canola	cytosol	27.03	19.59
CDY38812	Canola	cytosol	27.64	19.32
CDY38355	Canola	cytosol	27.44	19.26
CDY39836	Canola	cytosol	26.22	19.0
CDX84466	Canola	cytosol	27.03	18.97
CDY40878	Canola	cytosol, plastid	27.03	18.87
CDY04652	Canola	cytosol	28.25	18.83
CDY31344	Canola	cytosol	25.81	18.76
CDY08194	Canola	cytosol	28.25	18.53
CDX88355	Canola	cytosol	26.02	18.1
CDX87529	Canola	plasma membrane	26.22	17.36
CDX96584	Canola	cytosol, plasma membrane, plastid	18.29	16.95
CDX96585	Canola	cytosol	4.07	14.93
CDY38354	Canola	plasma membrane	10.16	9.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20	GO:A0A078C3S3	EnsemblPlants:CDX70854
ProteinID:CDX70854	ProteinID:CDX70854.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00140748001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF284	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDD0B4	SEG:seg	:	:	:	:

Description

BnaC03g09380D

Coordinates

chrLK031791:-:2396429..2398936

Molecular Weight (calculated)

55341.3 Da

IEP (calculated)

6.604

GRAVY (calculated)

-0.528

Length

492 amino acids

Sequence
(BLAST)

001: MERVRESSET LASTTTSSSS PSCDVDVENR GKQLSPFSTR RSRAGFSDSF SSHDLQSFCS NQENIKLYPN QTESDDDLSR SIESGTSCPV VSTSDSSSSE
101: AHHHHSHHHI GLTSGQWRGR FVRLLKKGSS AMPFNTPLKG VPKLTRRKSK RIRDNMVPVL PATSLDTGDL FCFKPSWRNY SLQDIQTATN GYSRENLIGE
201: GGYAEVYKGQ MADGQIVAIK KLTRGSAEEM TMDYLSELGI IVHVDHPNIA KLIGYCVEGG MHLVLQLSPN GSLASLLYEA KEKLSWSIRY KVATGTAEGL
301: YYLHEGCQRR IIHKDIKASN ILLTENFEAQ ISDFGLAKWL PDQWTHHTLS KIEGTFGYLP PEFFMHGIVD EKTDVYAYGV LLLELITGKQ ALDSAQHSLV
401: MWAKPLIKEN KIKQLVDPVM GDDYDLEELE RLVVEIFRGD KGSLDQLKQR QNSKLQRTYS EELLDNEEYN STRYLNDINR HMETVLGTSK NS

Best Arabidopsis Sequence Match ( AT5G18910.1 )
(BLAST)

001: MEGLRDSSSQ TISSTTSSSS SPSCDVDVDN RGKQLTPSTR RSRAGFSDSF SSHDLSSFCR DEEVKTFCPI KSESDDELLR SIEAETSSSV VSTSDSSETH
101: HHHHHHHSSG GPNNGHWRRG FFRLLKKGSS AMPFNTFTPL KGVPKLTRRK SKRIRDNMVP VIPALDTDHL FYFKPSWRNF SLRDIQTATN DYSRENLIGE
201: GGYAEVYKGQ MADGQIVAIK KLTRGSAEEM TMDYLSELGI IVHVDHPNIA KLIGYCVEGG MHLVLELSPN GSLASLLYEA KEKLNWSMRY KVAMGTAEGL
301: YYLHEGCQRR IIHKDIKASN ILLTQNFEAQ ISDFGLAKWL PDQWTHHTVS KVEGTFGYLP PEFFMHGIVD EKTDVYAYGV LLLELITGRQ ALDSSQHSIV
401: MWAKPLIKEN KIKQLVDPIL EDDYDVEELD RLVFIASLCI HQTSMNRPQM SQVVEILRGD KCSLDKLRER ENSKLQRTYS EELLDNEEYN STRYLNDINR
501: HMETVLGTSK D

Arabidopsis Description

At5g18910 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.