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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY08194 Canola cytosol 94.58 93.07
CDX96585 Canola cytosol 15.72 86.57
CDY38812 Canola cytosol 76.96 80.68
AT1G21590.1 Thale cress cytosol 79.54 77.65
CDX96584 Canola cytosol, plasma membrane, plastid 54.61 75.89
CDY38355 Canola cytosol 61.79 65.05
CDX88355 Canola cytosol 60.98 63.65
CDY40878 Canola cytosol, plastid 59.62 62.41
CDX87529 Canola plasma membrane 60.03 59.62
VIT_18s0001g01680.t01 Wine grape cytosol 54.34 52.83
KRH53309 Soybean cytosol, nucleus, plasma membrane 52.44 52.09
KRH18041 Soybean cytosol 51.9 52.04
Solyc04g057930.2.1 Tomato cytosol 54.06 51.89
KRH64607 Soybean cytosol 52.3 51.47
KRH16441 Soybean cytosol, nucleus, plasma membrane 50.81 51.02
PGSC0003DMT400065131 Potato cytosol 48.65 50.85
CDY71941 Canola cytosol 23.04 50.75
CDY72015 Canola cytosol 23.04 49.85
GSMUA_Achr7P23280_001 Banana cytosol 43.09 49.07
CDY38354 Canola plasma membrane 35.77 48.89
CDY39836 Canola cytosol 44.31 48.16
CDY31344 Canola cytosol 44.17 48.15
CDY43771 Canola cytosol 42.95 46.69
CDX84466 Canola cytosol 44.17 46.51
GSMUA_Achr6P18680_001 Banana cytosol 43.9 46.29
CDY26785 Canola mitochondrion, plastid 26.02 46.15
CDY47477 Canola mitochondrion, plastid 25.47 45.19
GSMUA_Achr6P25830_001 Banana cytosol, nucleus, plasma membrane 45.8 44.83
KXG27975 Sorghum plastid 41.87 41.93
Zm00001d053080_P002 Maize mitochondrion, plastid 41.46 41.41
Os11t0194900-01 Rice cytosol 37.4 41.38
CDX75481 Canola cytosol 22.49 41.29
TraesCS4B01G099900.2 Wheat mitochondrion, plastid 40.24 40.68
TraesCS5B01G115700.1 Wheat plastid 26.56 40.41
TraesCS4A01G221700.1 Wheat cytosol, mitochondrion, nucleus, plastid 39.97 40.41
TraesCS4D01G096100.3 Wheat plastid 40.11 40.38
CDY49158 Canola cytosol 8.67 40.0
CDX69106 Canola cytosol, plastid 25.75 39.18
CDY30299 Canola mitochondrion 19.78 37.73
HORVU4Hr1G017860.2 Barley mitochondrion, plastid 40.38 37.63
CDY52583 Canola mitochondrion 19.65 37.47
Zm00001d023588_P001 Maize cytosol 32.38 37.05
Os12t0180500-00 Rice mitochondrion 36.45 36.9
CDY49301 Canola mitochondrion 19.24 36.69
CDY49535 Canola mitochondrion 18.97 36.55
TraesCS5D01G125300.1 Wheat mitochondrion 36.18 36.03
TraesCS5A01G114900.1 Wheat mitochondrion 36.04 35.95
HORVU5Hr1G037570.3 Barley cytosol, nucleus 32.66 35.86
CDY70924 Canola cytosol 17.62 34.85
OQU78841 Sorghum mitochondrion 36.59 34.79
CDX96147 Canola cytosol, plastid 21.82 33.97
CDY55677 Canola cytosol 21.68 33.76
CDY37641 Canola cytosol 18.29 33.33
CDX74624 Canola cytosol 18.16 33.09
CDY41754 Canola cytosol, plastid 18.29 32.85
CDY37833 Canola cytosol 20.46 32.33
CDY40698 Canola cytosol 19.65 32.29
CDX74151 Canola cytosol 19.65 32.29
CDY08783 Canola cytosol 19.92 32.24
CDY14578 Canola cytosol 19.65 32.22
CDY66762 Canola cytosol, plastid 18.02 31.97
CDY33949 Canola cytosol 20.87 30.99
CDY71497 Canola cytosol 13.41 30.65
CDX69825 Canola cytosol 19.78 30.48
CDY40103 Canola cytosol 19.78 30.48
CDY01702 Canola plastid 22.09 30.47
CDX74559 Canola cytosol 22.22 30.43
CDY41938 Canola cytosol 20.6 30.28
CDY27793 Canola cytosol 20.46 30.08
CDX97023 Canola cytosol 19.92 29.94
CDY65404 Canola cytosol, nucleus, plastid 21.82 29.87
HORVU0Hr1G029980.2 Barley vacuole 22.49 29.59
CDX85756 Canola cytosol 19.38 29.55
CDY49731 Canola nucleus 23.17 29.48
CDY47188 Canola cytosol, plastid 19.24 28.8
CDX88908 Canola cytosol, plastid 19.11 28.66
CDX70854 Canola cytosol, plastid 18.83 28.25
CDY02597 Canola cytosol, plastid 19.78 28.13
CDY25891 Canola cytosol 15.58 25.73
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.36Gene3D:3.30.200.20Gene3D:3.40.50.620GO:A0A078EUK8EnsemblPlants:CDY04652
ProteinID:CDY04652ProteinID:CDY04652.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00119250001
InterPro:IPR000719InterPro:IPR014729InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF00582ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF508InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
InterPro:Rossmann-like_a/b/a_foldSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE116DInterPro:UspA
SEG:seg:::::
Description
BnaC05g16900D
Coordinates
chrLK031956:-:622095..625310
Molecular Weight (calculated)
81370.5 Da
IEP (calculated)
5.805
GRAVY (calculated)
-0.317
Length
738 amino acids
Sequence
(BLAST)
001: MTENDVITGG GGCTVVVGVK LDASSSELLD WALVKVAEPG DTVIALHILT NEITDQAGNS SFLSLVKTLD SVREVYEGLC KLKQVELKLK LCRGSSSRKV
101: LVREAKLCNA SKVVVGVSKS YHTIHSSVSV AKYLARKLAK DCWVMAVDNG KVMFQKDGSP LTIHQSKGKS NARRNTLSSF FQMPVTLQKN TKVVNNSEEG
201: GEEEEAEEDR SSGHSLRQAL VSSCLRNRSV CGNVSGSSCY DVDQEENADK GDLTRFINLL VKEIPEFRPG WPLLCRVPSS DVLVNVPRSS SYRRIPVAQW
301: VLKLPSRTNS AVGSSDTKQI GFDFSESEDD NNKLSSLNAE GPAIVPDGND SVIVKCSPDN SPEELEGLHE RVSTSCQSFK YNELVSVTSN FCPDNFIGKG
401: GSSKVYRGHL PNGREVAVKI LKQTKGVLND FVAEIEIITA LNHKNVISLL GYCFENSSLL LVYNYLSRGS LEENLHGNKR VSVAFGWNER YKVAVGIAEA
501: LDYLHNSAPQ AVIHRDVKSS NILLSDDFEP QLSDFGLAKW ASASTTQTIC SDVSGTFGYL APEYFMYGKM NDKIDVYAYG VVLLELLSGR KPINSESPKA
601: RQSLVMWAKP ILDDRDYSQL LDPSLLDDND GDQMERMALA ATLCIRHNPQ SRPDMGMVLN LLKGDMEKLK WAKEEVSIGL EDSKLLKDEK LHRSNLQSHL
701: NLAFLDMEDD AHSMVSMDQG ISVEDYLKGR ESRSSSFN
Best Arabidopsis Sequence Match ( AT1G21590.1 )
(BLAST)
001: MTENGVVTGG GHTVMVGVKF DESSNELLDW ALVKVAEPGD TVIALHVLGN EIVDRADNSS LVSIVKNFDS VLEVYEGFCK LKQLELKLKL SRGSSTRKIL
101: VKEAKMCSAS KVVVGISRRF HTIHSSVSVA KYLARKVAKD CWVLAVDNGK VMFQKDGSSS IIHHSKGKSD ARRNTLSSFF QMPVTLRKNT KVVNHSEVEE
201: EEAEEDHSNG QSLRRSLVYA CLGNCSVRDM NSLPTPGNLS RSSSCNGDQD DNADLHKAMA LVPAKFPEDL TPFITMLVKE LPEFRPGWPL LCRVASSDVL
301: ASAPRSSSFR KIPVVQWVLK LPARTNSVVG SSDTKQIGFD SSESEENDKL SSSNVERQAI VPDESMIVKC SLDHSSGRFP ENVEGLQARI STSCQFFTYK
401: ELVSVTSNFC ADNFIGKGGS SRVFRGYLPN GREVAVKILK RTECVLKDFV AEIDIITTLH HKNVISLLGY CFENNNLLLV YNYLSRGSLE ENLHGNKKDL
501: VAFRWNERYK VAVGIAEALD YLHNDAPQPV IHRDVKSSNI LLSDDFEPQL SDFGLAKWAS ESTTQIICSD VAGTFGYLAP EYFMYGKMNN KIDVYAYGVV
601: LLELLSGRKP VNSESPKAQD SLVMWAKPIL DDKEYSQLLD SSLQDDNNSD QMEKMALAAT LCIRHNPQTR PTMGMVLELL KGDVEMLKWA KLQVSNPLED
701: SMLLKDEKLR RSNLQSHLNL AFLDMEDDSL SMGSMEQGIS VEEYLKGRTS RSSSFN
Arabidopsis Description
At1g21590/F24J8_9 [Source:UniProtKB/TrEMBL;Acc:Q8VZG4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.