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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024249.1-P Field mustard cytosol 99.12 99.26
CDX84466 Canola cytosol 98.38 95.29
CDY39836 Canola cytosol 86.75 86.75
CDY31344 Canola cytosol 85.71 85.97
AT5G63940.1 Thale cress cytosol 87.92 84.68
KRH53925 Soybean plasma membrane 51.69 50.14
KRH64008 Soybean cytosol, nucleus, plasma membrane 51.4 49.93
CDY72015 Canola cytosol 23.12 46.04
CDY71941 Canola cytosol 22.68 45.97
CDY38355 Canola cytosol 47.42 45.93
GSMUA_Achr7P23280_001 Banana cytosol 43.74 45.83
Solyc01g068270.2.1 Tomato cytosol 48.01 45.47
CDY40878 Canola cytosol, plastid 46.83 45.11
PGSC0003DMT400017573 Potato cytosol 47.13 44.63
CDX96585 Canola cytosol 8.69 44.03
CDX88355 Canola cytosol 45.51 43.71
CDY38812 Canola cytosol 45.07 43.47
CDY08194 Canola cytosol 47.72 43.2
CDY04652 Canola cytosol 46.69 42.95
TraesCS5B01G115700.1 Wheat plastid 30.49 42.68
GSMUA_Achr6P25830_001 Banana cytosol, nucleus, plasma membrane 47.28 42.57
GSMUA_Achr6P18680_001 Banana cytosol 43.89 42.57
CDY47477 Canola mitochondrion, plastid 25.77 42.07
CDY26785 Canola mitochondrion, plastid 25.63 41.83
TraesCS4B01G099900.2 Wheat mitochondrion, plastid 44.92 41.78
TraesCS4A01G221700.1 Wheat cytosol, mitochondrion, nucleus, plastid 44.92 41.78
TraesCS4D01G096100.3 Wheat plastid 44.77 41.47
CDX87529 Canola plasma membrane 45.36 41.45
Os11t0194900-01 Rice cytosol 39.91 40.63
KXG27975 Sorghum plastid 43.3 39.89
CDX96584 Canola cytosol, plasma membrane, plastid 31.08 39.74
Zm00001d053080_P002 Maize mitochondrion, plastid 43.0 39.51
CDX75481 Canola cytosol 22.83 38.56
HORVU4Hr1G017860.2 Barley mitochondrion, plastid 44.77 38.38
Os12t0180500-00 Rice mitochondrion 40.65 37.86
Zm00001d023588_P001 Maize cytosol 35.64 37.52
HORVU5Hr1G037570.3 Barley cytosol, nucleus 36.38 36.76
TraesCS5D01G125300.1 Wheat mitochondrion 39.62 36.3
TraesCS5A01G114900.1 Wheat mitochondrion 39.18 35.95
CDX69106 Canola cytosol, plastid 25.63 35.88
CDY30299 Canola mitochondrion 19.88 34.88
CDY49535 Canola mitochondrion 19.59 34.73
CDY49301 Canola mitochondrion 19.73 34.63
CDY52583 Canola mitochondrion 19.73 34.63
OQU78841 Sorghum mitochondrion 38.88 34.02
CDY70924 Canola cytosol 18.26 33.24
CDY49158 Canola cytosol 7.66 32.5
CDX96147 Canola cytosol, plastid 22.53 32.28
CDY55677 Canola cytosol 22.39 32.07
CDY37641 Canola cytosol 19.0 31.85
HORVU0Hr1G029980.2 Barley vacuole 26.21 31.73
CDX74624 Canola cytosol 18.85 31.6
CDY41754 Canola cytosol, plastid 19.0 31.39
CDY66762 Canola cytosol, plastid 18.85 30.77
CDY14578 Canola cytosol 20.32 30.67
CDY08783 Canola cytosol 20.47 30.48
CDY38354 Canola plasma membrane 24.01 30.19
CDX74151 Canola cytosol 19.88 30.07
CDY40698 Canola cytosol 19.88 30.07
CDY01702 Canola plastid 23.12 29.35
CDY37833 Canola cytosol 20.18 29.34
CDY65404 Canola cytosol, nucleus, plastid 23.27 29.31
CDX74559 Canola cytosol 23.27 29.31
CDX69825 Canola cytosol 20.47 29.02
CDX97023 Canola cytosol 20.77 28.72
CDY49731 Canola nucleus 24.45 28.62
CDY33949 Canola cytosol 20.77 28.37
CDY40103 Canola cytosol 19.88 28.18
CDX85756 Canola cytosol 20.03 28.1
CDY27793 Canola cytosol 20.62 27.89
CDY41938 Canola cytosol 20.62 27.89
CDY71497 Canola cytosol 13.11 27.55
CDX88908 Canola cytosol, plastid 19.88 27.44
CDY47188 Canola cytosol, plastid 19.73 27.18
CDX70854 Canola cytosol, plastid 19.59 27.03
CDY25891 Canola cytosol 17.53 26.62
CDY02597 Canola cytosol, plastid 20.03 26.2
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.36Gene3D:3.30.200.20GO:A0A078I1T3UniProt:A0A078I1T3EnsemblPlants:CDY43771
ProteinID:CDY43771ProteinID:CDY43771.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00077270001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF244InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52402SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE95E6SEG:seg:::
Description
BnaA06g23070DBnaA06g23070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1T3]
Coordinates
chrLK032568:+:58459..61787
Molecular Weight (calculated)
73845.8 Da
IEP (calculated)
5.424
GRAVY (calculated)
-0.219
Length
679 amino acids
Sequence
(BLAST)
001: MTPSGGGGVE EPATASDAEG SALVIIGVKP DEWSREVLTW SLVNVARPGD RIVALHVLDY SLEGSTSLVS LVDLKLKVFR GKSARKVLVQ EVKSSGATSL
101: IVGSSKRHHT IRSSASLAKY CARNLAKDVS VFAVKSGKIM FRRVPSNNDG PHMIVPCGSP NVAIEAAKIG NSFSPARTSS RWTSRPSRTS SLQSTESSGV
201: DNSLALVPVQ TNETESGQGW HFFRGLYGKR SSWTKVSAKR AVLQWVSRLR GRNSEAVAYL DRKRSDSGCD EDCSSSVDGE DVSVSRSGSE HMLSPLSPCL
301: GSDNVPEELE GLHEKYSSTC RLFTYDEVVT ITSNFASDNL IGEGGNSYVY RGDLSDGREL AVKALKPCLD VLKEFILEIE VVTSVHHKNI VSLFGFCFEN
401: NNLMLVYDYV PRGSLEENLH GNRKDAATFG WLERYKVAVG VAEALDYLHN THDPEVIHRD VKSSNILLAD DFEPQLSDFG FASLASSAAQ HVSCGGIAGT
501: FGYLAPEYFM HGKVTDKIDV YAFGVVLLEL ISGRKPICVD QSKGQESLVM WANPILESGK FAQLLDPSLE ADDSSNDLIE KLLLAATLCI KRAPHDRPQI
601: GLVVKILQGD EDATEWGKQQ VKASEDATAY LTNIESHINL ALLDLEDDAA SDSSPEASSI SVEDYLKGRW SRTASFSFN
Best Arabidopsis Sequence Match ( AT5G63940.1 )
(BLAST)
001: MKPTGEGGGE VAGAVAEGSA LLIVGVKPDE WSREVLTWSL VNVARPGDRI VALHVLDYSL EGSTSLISLV RNFDTMLGVY ESFCNLKQVD LKLKVFRGKS
101: ARKVLVQEVK SCGATSLIVG SSRKHHTIRS SASLAKYCAR NLAKDVSVFA VKSGKIMFRR VPNTNGADGP QMNIPSLVCG SPDIAIEAAK IGNSFSPART
201: SSRWTRTSRS SSLQSPDSLG VDNLLALVPV QTNETDSGSL ESGPGWHFLR GLYGNNRKSW TKVSAKKAVL QWVSRLRGRH SETVIYLDRK RSDSGCDEDC
301: SSSIDGEDVS ISRFGSELMQ SPLSPFIGSN NIPEELEGLH EKYSSTCRLF TYEEVLSITS NFASENLVGE GGNSYVYRGD LPDGRELAVK ILKPCLDVLK
401: EFILEIEVIT SVHHKNIVSL FGFCFENNNL MLVYDYLPRG SLEENLHGNR KDAKKFGWME RYKVAVGVAE ALDYLHNTHD PEVIHRDVKS SNVLLADDFE
501: PQLSDFGFAS LASSTSQHVA GGDIAGTFGY LAPEYFMHGK VTDKIDVYAF GVVLLELISG RKPICVDQSK GQESLVLWAN PILDSGKFAQ LLDPSLENDN
601: SNDLIEKLLL AATLCIKRTP HDRPQIGLVL KILQGEEEAT EWGKQQVRAS EDVSAYLTNI ESHINLALLD LEDDAASDSS PEASSISVEE YLKGRWSRTA
701: SFNFN
Arabidopsis Description
At5g63940 [Source:UniProtKB/TrEMBL;Acc:Q9LVN9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.