Factsheet for PGSC0003DMT400081750

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080520.2.1	Tomato	cytosol	97.94	97.94
PGSC0003DMT400079113	Potato	cytosol	68.66	65.29
VIT_05s0020g02230.t01	Wine grape	cytosol	51.13	50.92
KRH11304	Soybean	cytosol, nucleus, vacuole	20.0	49.74
GSMUA_AchrUn_...	Banana	mitochondrion	39.38	49.1
PGSC0003DMT400009745	Potato	cytosol	43.92	48.41
KRH20962	Soybean	plasma membrane	49.69	46.89
CDY47188	Canola	cytosol, plastid	47.22	46.45
CDY02597	Canola	cytosol, plastid	49.69	46.44
Bra023698.1-P	Field mustard	cytosol, plastid	47.01	46.25
CDX88908	Canola	cytosol, plastid	46.8	46.14
CDX70854	Canola	cytosol, plastid	46.6	45.94
AT5G18910.1	Thale cress	cytosol, plastid	48.25	45.79
GSMUA_Achr1P25900_001	Banana	cytosol	39.38	45.05
Bra006483.1-P	Field mustard	cytosol, plastid	43.51	41.95
PGSC0003DMT400013990	Potato	mitochondrion	29.28	37.87
PGSC0003DMT400041603	Potato	cytosol	38.76	37.45
PGSC0003DMT400060605	Potato	cytosol	36.29	37.13
PGSC0003DMT400070634	Potato	cytosol	34.43	27.15
PGSC0003DMT400026989	Potato	cytosol	24.54	22.8
PGSC0003DMT400078652	Potato	cytosol	23.71	22.24
PGSC0003DMT400047943	Potato	plastid	24.33	20.96
PGSC0003DMT400015833	Potato	cytosol	28.66	20.2
PGSC0003DMT400065131	Potato	cytosol	28.25	19.41
PGSC0003DMT400017573	Potato	cytosol	28.45	19.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.36	MapMan:27.4.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D502	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400032103
PGSC:PGSC0003DMG400032103	EnsemblPlants:PGSC0003DMT400081750	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF284	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002965438	SEG:seg	:	:	:	:

Description

Kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032103]

Coordinates

chr1:-:60804914..60808705

Molecular Weight (calculated)

54061.4 Da

IEP (calculated)

4.951

GRAVY (calculated)

-0.322

Length

485 amino acids

Sequence
(BLAST)

001: METILEHSVS PCENTCNNVD EEESDEELFK VGPKLLFCAS SISLTAEEFR SLSVGEDHDM DEDSTREVIK EDKVNEESIR EASENQTDQS ETTTSKPSTS
101: DSDGWQGFIK RLKKGPSIQL HTFHPTIPSL PSLPSIKMLS KRKSRSARRS MPMLPAPILD ADLQQCFEAN WKNFSLTELK QATNNFSSDN LIGEGGYSEV
201: YKGLLKDGQP VAVKRLTRGS QEEMTSDYLS ELGILVHVKH ANVANVIGYG VEGGMHLVLP LSPHGSLANM LSGDRGKLTW QVRYNIALGT AAGLAYLHEG
301: CQRRIIHRDI KAANVLLTED FEAQITDFGL AKWLPDKWTH LTVSQVEGTF GYLPPEFFMH GIVDEKTDVY AFGVLLLEIV SGRPALDEAH NSVVMWAKPL
401: LLNKKNSEIV DPSLGDAYDL EQLNQILMVA SLCIQQFSTD RPSMIQVEQM LVAVDGILQS KKKFQRWPPL KRRCAIELDA LLESP

Best Arabidopsis Sequence Match ( AT5G18910.1 )
(BLAST)

001: MEGLRDSSSQ TISSTTSSSS SPSCDVDVDN RGKQLTPSTR RSRAGFSDSF SSHDLSSFCR DEEVKTFCPI KSESDDELLR SIEAETSSSV VSTSDSSETH
101: HHHHHHHSSG GPNNGHWRRG FFRLLKKGSS AMPFNTFTPL KGVPKLTRRK SKRIRDNMVP VIPALDTDHL FYFKPSWRNF SLRDIQTATN DYSRENLIGE
201: GGYAEVYKGQ MADGQIVAIK KLTRGSAEEM TMDYLSELGI IVHVDHPNIA KLIGYCVEGG MHLVLELSPN GSLASLLYEA KEKLNWSMRY KVAMGTAEGL
301: YYLHEGCQRR IIHKDIKASN ILLTQNFEAQ ISDFGLAKWL PDQWTHHTVS KVEGTFGYLP PEFFMHGIVD EKTDVYAYGV LLLELITGRQ ALDSSQHSIV
401: MWAKPLIKEN KIKQLVDPIL EDDYDVEELD RLVFIASLCI HQTSMNRPQM SQVVEILRGD KCSLDKLRER ENSKLQRTYS EELLDNEEYN STRYLNDINR
501: HMETVLGTSK D

Arabidopsis Description

At5g18910 [Source:UniProtKB/TrEMBL;Acc:Q8GXZ5]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.