Factsheet for PGSC0003DMT400078652

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091470.2.1	Tomato	cytosol	98.45	98.45
PGSC0003DMT400026989	Potato	cytosol	79.5	78.74
VIT_14s0006g01420.t01	Wine grape	cytosol	73.31	73.03
KRH30957	Soybean	cytosol	68.28	69.49
KRG97925	Soybean	cytosol	68.47	69.28
CDX96147	Canola	cytosol, plastid	60.73	66.24
CDY55677	Canola	cytosol	59.96	65.4
AT1G66460.3	Thale cress	nucleus	60.73	63.56
Bra004167.1-P	Field mustard	cytosol, plastid	60.54	63.1
KRH73009	Soybean	plastid	62.09	62.45
KRH17378	Soybean	cytosol	61.51	62.35
Bra028150.1-P	Field mustard	cytosol	62.86	60.75
CDY01702	Canola	plastid	62.67	60.56
CDX74559	Canola	cytosol	62.67	60.11
CDY65404	Canola	cytosol, nucleus, plastid	62.67	60.11
AT5G37790.1	Thale cress	cytosol	63.64	59.6
GSMUA_Achr2P22530_001	Banana	plastid	50.29	51.69
PGSC0003DMT400013990	Potato	mitochondrion	22.63	31.2
PGSC0003DMT400009745	Potato	cytosol	25.15	29.55
PGSC0003DMT400060605	Potato	cytosol	25.34	27.64
PGSC0003DMT400041603	Potato	cytosol	25.34	26.1
PGSC0003DMT400079113	Potato	cytosol	23.4	23.73
PGSC0003DMT400081750	Potato	cytosol	22.24	23.71
PGSC0003DMT400015833	Potato	cytosol	31.53	23.69
PGSC0003DMT400070634	Potato	cytosol	27.47	23.09
PGSC0003DMT400047943	Potato	plastid	23.98	22.02
PGSC0003DMT400017573	Potato	cytosol	30.17	21.76
PGSC0003DMT400065131	Potato	cytosol	28.82	21.1

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102594481	Gene3D:3.30.200.20	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D0H9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400030607	PGSC:PGSC0003DMG400030607
EnsemblPlants:PGSC0003DMT400078652	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF52	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002958574	RefSeq:XP_006357774.1	:

Description

Kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400030607]

Coordinates

chr2:+:41883427..41886640

Molecular Weight (calculated)

58062.0 Da

IEP (calculated)

9.282

GRAVY (calculated)

-0.297

Length

517 amino acids

Sequence
(BLAST)

001: MGFLPSSFTN SVEPLHSSYP LKTQALVTDT DNHCGNEELK IKSLIYRMIW DFGLACFVPT RRRRASGEDN GEKDKGVSSL EHNKAWLLAE SGACGTELIN
101: AEPHSVHSSF RFSFCSQVEL ESMNVNRCSS ATVLMVNLDN GLTDPLSREL KWRKIQSLER SISPVTHSLI RFTYPEIASA TRNFSKGRVL GRGALSYVFR
201: GRVGFMRTTV AIKRLDREDK ESPKAFCREL MIASSLHNPY IVPLVGFCID PEEGFFLVYK YVSGGSLERY LHDKKKRGVK GGPVLQWSTR YKVAVGIADS
301: IGYLHYGTER CVVHRDIKPS NILLSSKKTP KLCDFGLATW TPAPSVPFLC KTVKGTFGYL APEYFQHGKV SDKTDVYAFG VVLLELLTGR KPIEAKRGPG
401: EENLVLWAKP LLQQGALEKF LDPRLKFPQK NLQQIARMTQ AAAACIHTEE SRRSNMDEII AILRGTEVRS LTRKKSISSN NCVIDPQLQR TKSEMNSHLA
501: LAMLGVPDFE DDDFYCR

Best Arabidopsis Sequence Match ( AT5G37790.1 )
(BLAST)

001: MGFYEGASVH PRTPENKNTV NIPILTSSSS SSDLDGDNND NNNNTGIKTL LKRMIFDLGF ACFLPPLSST ENSGNNNGGG TSGGGGGGGG GGENNKAWLL
101: AETAPENMNP DPHSVHSSFR FSLCSQIELE KMKGEEPSLS ASSSCRNLSV SGGSTTVLMV NLENGVKETT GNATDDLRWT RARSLEKSIS PVANTLVRFS
201: YGEIVAATRN FSKGRVLGRG ACSYVFRGKI GMWRTALAIK RLDKEDKESP KSFCRELMIA SSLHSSNIVP LLGFCIDPEE GLFLVYKYVS GGSLEHYLHD
301: KKKKKGVKAA FGLPWSARYK VALGIADAIA YLHNGTEQCV VHRDIKPSNI LLSSKKIPKL CDFGLATWTA APSVPFLCKT VKGTFGYLAP EYFQHGKISD
401: KTDVYAFGVV LLELITGRKP IEARRASGQE NLVVWAKPLL DRGIEAIVEL LDPRLKCTRK NSVQMERMIR AAAACVINEE SRRPGMEEIV SILKGEEGVE
501: PETHSSRKTT NISGMIDSYT QLQQTKSEMK CHLDLAMLGV TEFEDDDHVY GR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LGB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.