Factsheet for PGSC0003DMT400015833

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g111570.2.1	Tomato	cytosol	96.08	95.94
VIT_03s0038g02400.t01	Wine grape	cytosol	55.38	55.95
CDY71941	Canola	cytosol	27.03	55.52
CDY72015	Canola	cytosol	27.18	54.84
CDY47477	Canola	mitochondrion, plastid	32.12	53.12
CDY26785	Canola	mitochondrion, plastid	31.98	52.88
KRH29291	Soybean	cytosol, golgi, nucleus	49.56	51.9
KRH24315	Soybean	cytosol	49.56	51.59
CDX75481	Canola	cytosol	29.51	50.5
GSMUA_Achr1P02390_001	Banana	cytosol	44.91	49.52
AT4G35030.5	Thale cress	cytosol	31.69	48.66
CDX69106	Canola	cytosol, plastid	34.16	48.45
AT2G16750.2	Thale cress	endoplasmic reticulum	43.02	47.97
GSMUA_Achr5P18920_001	Banana	cytosol	40.12	46.54
Bra001996.1-P	Field mustard	cytosol	42.59	46.07
GSMUA_Achr11P...	Banana	cytosol	41.28	45.66
Os03t0241600-01	Rice	cytosol	43.02	45.4
EER92574	Sorghum	cytosol	42.73	44.68
GSMUA_Achr4P25730_001	Banana	cytosol	43.46	44.49
TraesCS4B01G228200.1	Wheat	cytosol	42.15	44.27
TraesCS4D01G229100.2	Wheat	cytosol	41.57	43.6
HORVU4Hr1G064010.3	Barley	cytosol	42.01	43.59
TraesCS4A01G072300.1	Wheat	cytosol	41.86	43.5
Bra037291.1-P	Field mustard	mitochondrion, plastid	32.27	43.19
Bra011579.1-P	Field mustard	nucleus	23.84	43.04
Zm00001d028386_P001	Maize	cytosol	42.59	42.16
PGSC0003DMT400065131	Potato	cytosol	39.1	38.1
PGSC0003DMT400017573	Potato	cytosol	37.5	35.98
PGSC0003DMT400013990	Potato	mitochondrion	19.33	35.47
PGSC0003DMT400026989	Potato	cytosol	24.56	32.38
PGSC0003DMT400078652	Potato	cytosol	23.69	31.53
PGSC0003DMT400009745	Potato	cytosol	19.91	31.14
PGSC0003DMT400060605	Potato	cytosol	20.93	30.38
PGSC0003DMT400047943	Potato	plastid	24.85	30.37
PGSC0003DMT400079113	Potato	cytosol	21.51	29.02
PGSC0003DMT400081750	Potato	cytosol	20.2	28.66
PGSC0003DMT400041603	Potato	cytosol	20.64	28.29
PGSC0003DMT400070634	Potato	cytosol	24.42	27.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102599321	MapMan:18.4.1.36	Gene3D:3.30.200.20	Gene3D:3.40.50.620	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	UniProt:M1A6P0
PFAM:PF00069	PFAM:PF00582	EnsemblPlantsGene:PGSC0003DMG402006188	PGSC:PGSC0003DMG402006188	EnsemblPlants:PGSC0003DMT400015833	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF44	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220
SUPFAM:SSF52402	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002955309	InterPro:UspA	RefSeq:XP_006359697.1
SEG:seg	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402006188]

Coordinates

chr1:+:87555772..87559456

Molecular Weight (calculated)

77007.2 Da

IEP (calculated)

6.650

GRAVY (calculated)

-0.389

Length

688 amino acids

Sequence
(BLAST)

001: MIFAKILESE KRNVIVGIRF DGHIRELLNW ATVKVAEPGD RVIALHVCRN AESIANVKSS LDTYLYDYDG LCNKKQVDLI SVVTEGSSIR RVLVREAKNY
101: AALAVIVGTC KHSTLGGWTS IAKYCAKKLP TTTEVMAIDN GKVLFRRTST SQLKGSFSDP KPSLYLERIS TLKDCESEFG ESEISEFGRF SCEVSRTLER
201: WTNGTQNVKE ENTTPSGKHK KGSLSLGSVS LPTEDCAAAT TTPGWPLLQT TSSLNEPVKV KRKMSVVQWV MTLPNRSMLD SPKSNSSPKE NKNAFGMENS
301: YSLMDFIEKE SASVGSQLIK DYFGCKWFSY DVLRSSTSNF SSEKLIGKGG ENSVYKAVLS DGKSVAVKVL NSSEEARKNF RQEMDIMTRV EHKNIAHLLG
401: ICIEDPDLIS VYDFHSKGNL EENIHGRTKS VLPWERRFKI AVGIAEALNY LHNECRRPVI HRDIKSSNIL LNDDFEPQLS DFGLAIWGPT KASFLTHSDV
501: VGTFGYLAPE YFMYGKVSDK IDVYSFGVVL LELLSGRKAI GFETPSGQES LVMWAKPKLE SRNFNAILDE NLNVNIEDDQ VQRMILAARL CLTQAARLRP
601: NISQILKMLK GEKDGNEEVI ARNNNTEEYN DDEVYPDSSA ESHLSLAFLD VNYDNSTCFS SSQDQSSPLS SVDEYLRKRW SRSSSSEY

Best Arabidopsis Sequence Match ( AT2G16750.2 )
(BLAST)

001: MAVDKVIVKQ RNIILVGIPI DESGVEVLKW ALEEVAKHGD CVVVVHVCFT YYRALKSKSS LDRYLKPYIE FCSTKKIELK GEVLKGNSVL GVLVKEAKRY
101: NAMSVVVGVK QQSKLSLKIA KGCAKELPST TDILAIHRGN IVFRRSNHYQ LPLAQKISSR PSSELSEGFS DKDLAKTTGQ EKRKISGRSL SLPSVEVVDQ
201: TPGWPLLRTS TLATPMVQHQ TRKISVVNWV MSLPERFPHH PNQTCQQSFC DKQLKDILKD INRWFSYDVL KTATSDFSLE NLIGKGGCNE VYKGFLEDGK
301: GVAVKILKPS VKEAVKEFVH EVSIVSSLSH SNISPLIGVC VHYNDLISVY NLSSKGSLEE TLQGKHVLRW EERLKIAIGL GEALDYLHNQ CSNPVIHRDV
401: KSSNVLLSDE FEPQLSDFGL SMWGSKSCRY TIQRDVVGTF GYLAPEYFMY GKVSDKVDVY AFGVVLLELI SGRTSISSDS PRGQESLVMW AKPMIEKGNA
501: KELLDPNIAG TFDEDQFHKM VLAATHCLTR AATYRPNIKE ILKLLRGEDD VSKWVKIEED DEDGFDDEVY PNSNTELHLS LAMVDVEDND SVSNSSLERS
601: NNSLFSSSSS SSQELQS

Arabidopsis Description

At2g16750 [Source:UniProtKB/TrEMBL;Acc:B5X4Z9]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.