Factsheet for VIT_14s0030g02150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P22570_001	Banana	cytosol	77.12	79.73
GSMUA_Achr7P01390_001	Banana	cytosol	76.47	79.05
GSMUA_Achr1P04700_001	Banana	cytosol	73.2	75.68
GSMUA_Achr2P12680_001	Banana	cytosol	73.2	75.68
VIT_05s0020g04420.t01	Wine grape	cytosol	73.2	75.17
GSMUA_Achr1P27230_001	Banana	cytosol	71.9	74.32
KRH68729	Soybean	cytosol	71.9	73.83
KRG96966	Soybean	cytosol	71.24	73.15
VIT_17s0000g00580.t01	Wine grape	cytosol	71.24	73.15
GSMUA_Achr6P24410_001	Banana	cytosol	70.59	72.48
GSMUA_Achr5P09010_001	Banana	cytosol	69.28	71.62
VIT_08s0040g00470.t01	Wine grape	cytosol	67.97	69.8
KRH34082	Soybean	cytosol	66.67	68.46
VIT_06s0009g01910.t01	Wine grape	cytosol	67.97	67.97
VIT_00s0179g00280.t01	Wine grape	cytosol	66.01	67.79
KRG92667	Soybean	cytosol	65.36	67.11
KRG94637	Soybean	cytosol	47.71	64.04
Os03t0743500-02	Rice	nucleus	62.75	62.34
KXG37587	Sorghum	cytosol	61.44	61.04
Zm00001d033980_P001	Maize	cytosol	48.37	47.13
GSMUA_Achr3P25390_001	Banana	cytosol	56.21	46.99
TraesCS5A01G382800.2	Wheat	plastid	54.9	44.92
GSMUA_Achr1P14070_001	Banana	cytosol	62.09	42.04
VIT_02s0012g02060.t01	Wine grape	cytosol	42.48	39.88
VIT_05s0094g01240.t01	Wine grape	cytosol	41.83	38.79
VIT_02s0241g00140.t01	Wine grape	cytosol	37.25	38.78
VIT_16s0039g01880.t01	Wine grape	cytosol	37.25	34.97
VIT_01s0011g02470.t01	Wine grape	cytosol	35.29	33.33
VIT_17s0000g04460.t01	Wine grape	cytosol	34.64	33.12
VIT_07s0031g00700.t01	Wine grape	cytosol	43.14	32.67
KXG37588	Sorghum	mitochondrion, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100241881	wikigene:100241881	MapMan:35.1	EMBL:AM479591	ProteinID:CAN81743
ProteinID:CAN81743.1	ProteinID:CBI34166	ProteinID:CBI34166.3	UniProt:D7TUJ1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EMBL:FN596249	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
EntrezGene:LOC100241881	wikigene:LOC100241881	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050
PANTHER:PTHR23050:SF242	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00015CBA1B	ArrayExpress:VIT_14s0030g02150	EnsemblPlantsGene:VIT_14s0030g02150
EnsemblPlants:VIT_14s0030g02150.t01	RefSeq:XP_002274499	RefSeq:XP_002274499.1	RefSeq:XP_019080322.1	SEG:seg	:

Description

No Description!

Coordinates

chr14:-:7260667..7262611

Molecular Weight (calculated)

17446.4 Da

IEP (calculated)

3.787

GRAVY (calculated)

-0.494

Length

153 amino acids

Sequence
(BLAST)

001: MRPNNGDVLT AEQIAEFQEA FCLFDMDGDG CITLDELATV MKSLEHSTTK EELQTMMDEV DVDGNGTIEF GEFLNLMARK MKESEAEEEL KEAFKVFDKD
101: QDGYISANEL RNVMFNLGER LTDEEAEQMI READLDGDGQ VNYEEFVRMM LAV

Best Arabidopsis Sequence Match ( AT1G66410.1 )
(BLAST)

001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK

Arabidopsis Description

CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.