CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96966	Soybean	cytosol	97.99	97.99
KRG94637	Soybean	cytosol	63.76	83.33
KRH31638	Soybean	cytosol	75.84	75.33
KRH34082	Soybean	cytosol	74.5	74.5
GSMUA_Achr7P01390_001	Banana	cytosol	73.83	74.32
KRH34350	Soybean	cytosol	74.5	74.0
KRG92449	Soybean	cytosol	73.83	73.33
KRH69070	Soybean	cytosol	73.83	73.33
GSMUA_Achr1P27230_001	Banana	cytosol	72.48	72.97
GSMUA_Achr4P22570_001	Banana	cytosol	72.48	72.97
KRG92667	Soybean	cytosol	72.48	72.48
GSMUA_Achr2P12680_001	Banana	cytosol	71.81	72.3
VIT_14s0030g02150.t01	Wine grape	cytosol	73.83	71.9
GSMUA_Achr1P04700_001	Banana	cytosol	71.14	71.62
GSMUA_Achr6P24410_001	Banana	cytosol	70.47	70.47
KRG94975	Soybean	nucleus	68.46	68.46
GSMUA_Achr5P09010_001	Banana	cytosol	67.79	68.24
KRH67274	Soybean	cytosol	62.42	62.84
KRG95596	Soybean	cytosol	61.07	61.49
KRH18664	Soybean	cytosol	57.72	61.43
Os03t0743500-02	Rice	nucleus	61.74	59.74
KXG37587	Sorghum	cytosol	59.73	57.79
KRH71363	Soybean	cytosol	56.38	56.38
KRH32074	Soybean	cytosol	53.69	53.69
KRG89812	Soybean	cytosol, mitochondrion	58.39	52.73
GSMUA_Achr3P25390_001	Banana	cytosol	59.06	48.09
Zm00001d033980_P001	Maize	cytosol	48.32	45.86
TraesCS5A01G382800.2	Wheat	plastid	55.7	44.38
GSMUA_Achr1P14070_001	Banana	cytosol	63.76	42.04
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	40.27	40.82
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	40.27	40.82
KRH25249	Soybean	cytosol	41.61	38.04
KRH30413	Soybean	cytosol	40.27	37.74
KRH04023	Soybean	cytosol	36.24	36.73
KRH10567	Soybean	endoplasmic reticulum	39.6	34.71
KRH07628	Soybean	cytosol	36.24	33.75
KRH62961	Soybean	cytosol	34.9	32.5
KRH56721	Soybean	cytosol	34.9	32.3
KRG98826	Soybean	cytosol	33.56	31.85
KRH43884	Soybean	cytosol	27.52	31.3
KRH54782	Soybean	cytosol	33.56	31.25
KRG98823	Soybean	cytosol	32.21	30.57
KXG37588	Sorghum	mitochondrion, nucleus	0.67	0.73

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100500550	MapMan:35.1	EMBL:ACUP02002123	EMBL:BT091487	UniProt:C6T231
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_03G246800	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH68729	ProteinID:KRH68729	ProteinID:KRH68729.1	PFAM:PF13499
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050	PANTHER:PTHR23050:SF330	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI0001B14E93	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:44366281..44367754

Molecular Weight (calculated)

17079.2 Da

IEP (calculated)

3.852

GRAVY (calculated)

-0.432

Length

149 amino acids

Sequence
(BLAST)

001: MKEALREEQI GEFLEAFCLF DKDGDGCITI EELSTAIRSL DENPTVEELQ IMMNEVDMDG NGTIEFGEFL NLMARKMKET EAEEELKEAF RVFDKDHDGY
101: ISPSELRSVM RTIGEKVTDE EVEQMVKEAD LDGDGLVDYE EFVRMMLAV

Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.