CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95596	Soybean	cytosol	93.92	93.92
VIT_00s0179g00280.t01	Wine grape	cytosol	78.38	77.85
KRH71363	Soybean	cytosol	75.0	74.5
KRH32074	Soybean	cytosol	73.65	73.15
GSMUA_Achr1P04700_001	Banana	cytosol	70.95	70.95
GSMUA_Achr1P27230_001	Banana	cytosol	70.95	70.95
PGSC0003DMT400083727	Potato	cytosol	68.92	69.39
GSMUA_Achr2P12680_001	Banana	cytosol	68.92	68.92
Solyc01g105630.2.1	Tomato	cytosol	68.24	68.71
KRH34350	Soybean	cytosol	69.59	68.67
KRG92449	Soybean	cytosol	68.92	68.0
KRH31638	Soybean	cytosol	68.92	68.0
KRH69070	Soybean	cytosol	68.92	68.0
KRG94975	Soybean	nucleus	68.24	67.79
GSMUA_Achr6P24410_001	Banana	cytosol	68.24	67.79
GSMUA_Achr7P01390_001	Banana	cytosol	67.57	67.57
GSMUA_Achr4P22570_001	Banana	cytosol	67.57	67.57
GSMUA_Achr5P09010_001	Banana	cytosol	66.22	66.22
KRH68729	Soybean	cytosol	62.84	62.42
KRG96966	Soybean	cytosol	62.16	61.74
KRH18664	Soybean	cytosol	57.43	60.71
KRH34082	Soybean	cytosol	58.78	58.39
Os03t0743500-02	Rice	nucleus	60.14	57.79
KXG37587	Sorghum	cytosol	60.14	57.79
KRG92667	Soybean	cytosol	57.43	57.05
KRG94637	Soybean	cytosol	40.54	52.63
KRG89812	Soybean	cytosol, mitochondrion	57.43	51.52
GSMUA_Achr3P25390_001	Banana	cytosol	58.78	47.54
Zm00001d033980_P001	Maize	cytosol	47.97	45.22
TraesCS5A01G382800.2	Wheat	plastid	52.7	41.71
GSMUA_Achr1P14070_001	Banana	cytosol	60.81	39.82
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	39.19	39.46
KRH62961	Soybean	cytosol	41.22	38.12
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	37.84	38.1
KRH56721	Soybean	cytosol	41.22	37.89
KRH30413	Soybean	cytosol	40.54	37.74
KRH07628	Soybean	cytosol	40.54	37.5
KRH10567	Soybean	endoplasmic reticulum	41.89	36.47
KRH04023	Soybean	cytosol	35.81	36.05
KRH25249	Soybean	cytosol	39.19	35.58
KRH54782	Soybean	cytosol	37.84	35.0
KRH43884	Soybean	cytosol	28.38	32.06
KRG98826	Soybean	cytosol	33.11	31.21
KRG98823	Soybean	cytosol	31.76	29.94
KXG37588	Sorghum	mitochondrion, nucleus	1.35	1.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100527005	MapMan:35.1	EMBL:ACUP02002049	EMBL:BT091812	UniProt:C6T303
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_03G157800	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:IPR002048	EnsemblPlants:KRH67274	ProteinID:KRH67274	ProteinID:KRH67274.1	PFAM:PF13499
PRINTS:PR00450	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050	PANTHER:PTHR23050:SF211	SMART:SM00054
SUPFAM:SSF47473	UniParc:UPI0001817FB8	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:37327417..37328441

Molecular Weight (calculated)

16867.8 Da

IEP (calculated)

3.910

GRAVY (calculated)

-0.404

Length

148 amino acids

Sequence
(BLAST)

001: MAGALTDDQI AEFHEAFCLI DKDSDGFITV DELATIIRSL EGNPTKEEIQ DMISEVDIDG NGSIDFEEFL NIMGRKMKET LAEELREAFK VFDRDQNGYI
101: SATELRHVMM NLGERLTDEE AEQMIREADL DGDGQVSFEE FSRIMMLK

Best Arabidopsis Sequence Match ( AT1G66410.1 )
(BLAST)

001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK

Arabidopsis Description

CAM4Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.