CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67274	Soybean	cytosol	93.92	93.92
VIT_00s0179g00280.t01	Wine grape	cytosol	75.68	75.17
KRH71363	Soybean	cytosol	73.65	73.15
KRH32074	Soybean	cytosol	72.3	71.81
KRG94975	Soybean	nucleus	68.24	67.79
PGSC0003DMT400083727	Potato	cytosol	66.89	67.35
KRH34350	Soybean	cytosol	68.24	67.33
GSMUA_Achr1P04700_001	Banana	cytosol	66.89	66.89
GSMUA_Achr1P27230_001	Banana	cytosol	66.89	66.89
KRH69070	Soybean	cytosol	67.57	66.67
KRH31638	Soybean	cytosol	67.57	66.67
Solyc01g105630.2.1	Tomato	cytosol	66.22	66.67
KRG92449	Soybean	cytosol	67.57	66.67
GSMUA_Achr2P12680_001	Banana	cytosol	66.22	66.22
GSMUA_Achr4P22570_001	Banana	cytosol	66.22	66.22
GSMUA_Achr7P01390_001	Banana	cytosol	65.54	65.54
GSMUA_Achr6P24410_001	Banana	cytosol	64.86	64.43
GSMUA_Achr5P09010_001	Banana	cytosol	62.16	62.16
KRH68729	Soybean	cytosol	61.49	61.07
KRH18664	Soybean	cytosol	57.43	60.71
KRG96966	Soybean	cytosol	60.81	60.4
Os03t0743500-02	Rice	nucleus	59.46	57.14
KRH34082	Soybean	cytosol	57.43	57.05
KXG37587	Sorghum	cytosol	58.78	56.49
KRG92667	Soybean	cytosol	56.08	55.7
KRG89812	Soybean	cytosol, mitochondrion	56.76	50.91
KRG94637	Soybean	cytosol	39.19	50.88
GSMUA_Achr3P25390_001	Banana	cytosol	58.78	47.54
Zm00001d033980_P001	Maize	cytosol	46.62	43.95
TraesCS5A01G382800.2	Wheat	plastid	50.68	40.11
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	39.19	39.46
KRH30413	Soybean	cytosol	41.22	38.36
KRH62961	Soybean	cytosol	41.22	38.12
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	37.84	38.1
KRH56721	Soybean	cytosol	41.22	37.89
GSMUA_Achr1P14070_001	Banana	cytosol	57.43	37.61
KRH07628	Soybean	cytosol	40.54	37.5
KRH25249	Soybean	cytosol	41.22	37.42
KRH04023	Soybean	cytosol	36.49	36.73
KRH10567	Soybean	endoplasmic reticulum	41.22	35.88
KRH54782	Soybean	cytosol	37.16	34.38
KRH43884	Soybean	cytosol	27.7	31.3
KRG98826	Soybean	cytosol	33.11	31.21
KRG98823	Soybean	cytosol	31.76	29.94
KXG37588	Sorghum	mitochondrion, nucleus	1.35	1.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100795656	MapMan:35.1	EMBL:ACUP02012120	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_19G160100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1N9L0
InterPro:IPR002048	EnsemblPlants:KRG95596	ProteinID:KRG95596	ProteinID:KRG95596.1	PFAM:PF13499	PRINTS:PR00450
ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050	PANTHER:PTHR23050:SF211	SMART:SM00054	SUPFAM:SSF47473
UniParc:UPI000233EEA0	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:42102839..42103941

Molecular Weight (calculated)

16709.7 Da

IEP (calculated)

3.910

GRAVY (calculated)

-0.390

Length

148 amino acids

Sequence
(BLAST)

001: MAGGLTDDQI AEFHEAFSLI DKDSDGFITV DELTTIIRSL EGNPTKEEIQ NMISEVDIDG NGSIDFEEFL NIMGRKMKET LAEELKEAFK VFDRDQNGYI
101: SATELRHVMT NLGERLTGEE AEQMIMEADL DGDGQVSFEE FARIMMLK

Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.