Factsheet for VIT_00s0179g00280.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67274	Soybean	cytosol	77.85	78.38
KRG95596	Soybean	cytosol	75.17	75.68
VIT_05s0020g04420.t01	Wine grape	cytosol	74.5	74.5
PGSC0003DMT400083727	Potato	cytosol	72.48	73.47
Solyc01g105630.2.1	Tomato	cytosol	71.14	72.11
GSMUA_Achr2P12680_001	Banana	cytosol	70.47	70.95
GSMUA_Achr1P04700_001	Banana	cytosol	67.11	67.57
GSMUA_Achr4P22570_001	Banana	cytosol	67.11	67.57
GSMUA_Achr7P01390_001	Banana	cytosol	66.44	66.89
VIT_17s0000g00580.t01	Wine grape	cytosol	66.44	66.44
VIT_08s0040g00470.t01	Wine grape	cytosol	66.44	66.44
GSMUA_Achr1P27230_001	Banana	cytosol	65.77	66.22
VIT_14s0030g02150.t01	Wine grape	cytosol	67.79	66.01
GSMUA_Achr6P24410_001	Banana	cytosol	65.77	65.77
KRH71363	Soybean	cytosol	65.77	65.77
VIT_06s0009g01910.t01	Wine grape	cytosol	66.44	64.71
KRH32074	Soybean	cytosol	64.43	64.43
GSMUA_Achr5P09010_001	Banana	cytosol	61.74	62.16
Os03t0743500-02	Rice	nucleus	59.73	57.79
KXG37587	Sorghum	cytosol	59.06	57.14
Zm00001d033980_P001	Maize	cytosol	48.32	45.86
GSMUA_Achr3P25390_001	Banana	cytosol	53.69	43.72
TraesCS5A01G382800.2	Wheat	plastid	53.69	42.78
GSMUA_Achr1P14070_001	Banana	cytosol	59.73	39.38
VIT_05s0094g01240.t01	Wine grape	cytosol	40.94	36.97
VIT_01s0011g02470.t01	Wine grape	cytosol	38.93	35.8
VIT_02s0012g02060.t01	Wine grape	cytosol	38.93	35.58
VIT_02s0241g00140.t01	Wine grape	cytosol	34.23	34.69
VIT_17s0000g04460.t01	Wine grape	cytosol	36.91	34.38
VIT_16s0039g01880.t01	Wine grape	cytosol	35.57	32.52
VIT_07s0031g00700.t01	Wine grape	cytosol	39.6	29.21
KXG37588	Sorghum	mitochondrion, nucleus	1.34	1.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:100249330	wikigene:100249330	MapMan:35.1	UniProt:A5AK95	EMBL:AM428672
ProteinID:CAN75765	ProteinID:CAN75765.1	ProteinID:CBI25054	ProteinID:CBI25054.3	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EMBL:FN595511	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	InterPro:IPR002048
EntrezGene:LOC100249330	wikigene:LOC100249330	PFAM:PF13499	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050
PANTHER:PTHR23050:SF211	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000151EE22	ArrayExpress:VIT_00s0179g00280	EnsemblPlantsGene:VIT_00s0179g00280
EnsemblPlants:VIT_00s0179g00280.t01	RefSeq:XP_002274848	RefSeq:XP_002274848.1	:	:	:

Description

No Description!

Coordinates

chrUn:-:7523198..7524929

Molecular Weight (calculated)

16976.9 Da

IEP (calculated)

3.831

GRAVY (calculated)

-0.429

Length

149 amino acids

Sequence
(BLAST)

001: MANALTEDQI VQFREAFCLI DKDSDGSITV EELATVIQSL DGHPTQEEVQ DMISEVDADG NRSIDFAEFL NIMARKMKEN VAEEIKEAFK VFDRDQDGYI
101: SAIELRNVMI NLGERLTDEE AEQMIREADM DGDGQVSYEE FAKMMMTFN

Best Arabidopsis Sequence Match ( AT4G14640.1 )
(BLAST)

001: MEETALTKDQ ITEFKEAFCL FDKDGDGCIT VEELATVIRS LDQNPTEQEL HDIITEIDSD SNGTIEFAEF LNLMAKKLQE SDAEEELKEA FKVFDKDQNG
101: YISASELSHV MINLGEKLTD EEVEQMIKEA DLDGDGQVNY DEFVKMMINI D

Arabidopsis Description

CML8Calmodulin-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:O23320]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.