CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32074	Soybean	cytosol	90.6	90.6
KRH67274	Soybean	cytosol	74.5	75.0
KRG95596	Soybean	cytosol	73.15	73.65
VIT_00s0179g00280.t01	Wine grape	cytosol	65.77	65.77
PGSC0003DMT400083727	Potato	cytosol	63.09	63.95
Solyc01g105630.2.1	Tomato	cytosol	62.42	63.27
KRH34350	Soybean	cytosol	59.06	58.67
GSMUA_Achr7P01390_001	Banana	cytosol	57.72	58.11
KRG92449	Soybean	cytosol	58.39	58.0
GSMUA_Achr2P12680_001	Banana	cytosol	57.05	57.43
GSMUA_Achr4P22570_001	Banana	cytosol	56.38	56.76
KRH31638	Soybean	cytosol	57.05	56.67
KRH69070	Soybean	cytosol	57.05	56.67
KRH68729	Soybean	cytosol	56.38	56.38
KRG96966	Soybean	cytosol	55.7	55.7
KRG94975	Soybean	nucleus	55.7	55.7
GSMUA_Achr1P04700_001	Banana	cytosol	55.03	55.41
GSMUA_Achr1P27230_001	Banana	cytosol	55.03	55.41
KRH34082	Soybean	cytosol	53.02	53.02
KRG94637	Soybean	cytosol	40.27	52.63
GSMUA_Achr6P24410_001	Banana	cytosol	52.35	52.35
GSMUA_Achr5P09010_001	Banana	cytosol	51.68	52.03
KRG92667	Soybean	cytosol	51.68	51.68
KRH18664	Soybean	cytosol	47.65	50.71
Os03t0743500-02	Rice	nucleus	51.01	49.35
KXG37587	Sorghum	cytosol	49.66	48.05
KRG89812	Soybean	cytosol, mitochondrion	46.98	42.42
Zm00001d033980_P001	Maize	cytosol	42.28	40.13
TraesCS5A01G382800.2	Wheat	plastid	46.98	37.43
GSMUA_Achr3P25390_001	Banana	cytosol	44.3	36.07
KRH25249	Soybean	cytosol	38.26	34.97
KRH30413	Soybean	cytosol	36.91	34.59
KRH62961	Soybean	cytosol	36.91	34.38
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	33.56	34.01
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	33.56	34.01
KRH04023	Soybean	cytosol	32.89	33.33
KRH56721	Soybean	cytosol	35.57	32.92
KRH54782	Soybean	cytosol	34.23	31.88
KRH07628	Soybean	cytosol	34.23	31.88
KRH10567	Soybean	endoplasmic reticulum	35.57	31.18
GSMUA_Achr1P14070_001	Banana	cytosol	46.98	30.97
KRH43884	Soybean	cytosol	26.85	30.53
KRG98826	Soybean	cytosol	28.19	26.75
KRG98823	Soybean	cytosol	26.85	25.48
KXG37588	Sorghum	mitochondrion, nucleus	1.34	1.46

Protein Annotations

EMBL:ACUP02000894	EnsemblPlants:KRH71363	EnsemblPlantsGene:GLYMA_02G143800	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23050
PANTHER:PTHR23050:SF211	PFAM:PF13499	PFscan:PS50222	ProteinID:KRH71363	ProteinID:KRH71363.1	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0002336D44	UniProt:I1JF64	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr2:+:14832657..14833847

Molecular Weight (calculated)

17191.0 Da

IEP (calculated)

4.024

GRAVY (calculated)

-0.542

Length

149 amino acids

Sequence
(BLAST)

001: MANAWTEDQI AIFHEAFDVV DKDSDGFISV DELLSIVRSL EGNSTKEEIR EMISEVDIDG NGRSVNFENF LKIMGRTMKE NQTEELKDSF KVFDRDNDGY
101: ISATELRQVM VKLGERLTDE EVEQMIREAD LDGDGRVSYE EFVRFMTLN

Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.