CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71363	Soybean	cytosol	90.6	90.6
KRH67274	Soybean	cytosol	73.15	73.65
KRG95596	Soybean	cytosol	71.81	72.3
VIT_00s0179g00280.t01	Wine grape	cytosol	64.43	64.43
PGSC0003DMT400083727	Potato	cytosol	61.07	61.9
Solyc01g105630.2.1	Tomato	cytosol	60.4	61.22
KRH34350	Soybean	cytosol	57.05	56.67
KRG92449	Soybean	cytosol	56.38	56.0
GSMUA_Achr7P01390_001	Banana	cytosol	55.03	55.41
GSMUA_Achr2P12680_001	Banana	cytosol	54.36	54.73
GSMUA_Achr4P22570_001	Banana	cytosol	54.36	54.73
GSMUA_Achr1P27230_001	Banana	cytosol	53.69	54.05
GSMUA_Achr1P04700_001	Banana	cytosol	53.69	54.05
KRH31638	Soybean	cytosol	54.36	54.0
KRH69070	Soybean	cytosol	54.36	54.0
KRG94975	Soybean	nucleus	53.69	53.69
KRG96966	Soybean	cytosol	53.69	53.69
KRH68729	Soybean	cytosol	53.69	53.69
GSMUA_Achr5P09010_001	Banana	cytosol	51.68	52.03
KRG94637	Soybean	cytosol	39.6	51.75
GSMUA_Achr6P24410_001	Banana	cytosol	51.01	51.01
KRH34082	Soybean	cytosol	51.01	51.01
KRG92667	Soybean	cytosol	51.01	51.01
KRH18664	Soybean	cytosol	45.64	48.57
Os03t0743500-02	Rice	nucleus	47.65	46.1
KXG37587	Sorghum	cytosol	46.31	44.81
KRG89812	Soybean	cytosol, mitochondrion	44.97	40.61
Zm00001d033980_P001	Maize	cytosol	38.26	36.31
KRH25249	Soybean	cytosol	38.93	35.58
KRH30413	Soybean	cytosol	37.58	35.22
KRH62961	Soybean	cytosol	37.58	35.0
GSMUA_Achr3P25390_001	Banana	cytosol	42.95	34.97
KRH56721	Soybean	cytosol	37.58	34.78
KRH77406	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	34.23	34.69
KRH28027	Soybean	cytosol, endoplasmic reticulum, nucleus	32.89	33.33
KRH04023	Soybean	cytosol	32.89	33.33
TraesCS5A01G382800.2	Wheat	plastid	41.61	33.16
KRH07628	Soybean	cytosol	34.9	32.5
KRH54782	Soybean	cytosol	34.23	31.88
GSMUA_Achr1P14070_001	Banana	cytosol	46.31	30.53
KRH10567	Soybean	endoplasmic reticulum	34.23	30.0
KRH43884	Soybean	cytosol	26.17	29.77
KRG98826	Soybean	cytosol	26.85	25.48
KRG98823	Soybean	cytosol	25.5	24.2
KXG37588	Sorghum	mitochondrion, nucleus	1.34	1.46

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:106794887	MapMan:35.1	EMBL:ACUP02006094	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	EnsemblPlantsGene:GLYMA_10G030500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	UniProt:I1L879
InterPro:IPR002048	EnsemblPlants:KRH32074	ProteinID:KRH32074	ProteinID:KRH32074.1	PFAM:PF13499	ScanProsite:PS00018
PFscan:PS50222	PANTHER:PTHR23050	PANTHER:PTHR23050:SF211	SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI000233D521

Description

hypothetical protein

Coordinates

chr10:-:2652398..2653558

Molecular Weight (calculated)

17128.1 Da

IEP (calculated)

3.998

GRAVY (calculated)

-0.399

Length

149 amino acids

Sequence
(BLAST)

001: MANAWTEDQI AIFHEAFVVV DKDSDGFITV DELISIVRSL EGNATKEKIQ EMISEVDING NSLSVNFEDF LKIMGRTIKE NLTEELKDSF KVFDRDNDGY
101: ISATELRQVM VKLGERLTDE EVEQMIREAD LDGDGRDSYE EFLRFMTLN

Best Arabidopsis Sequence Match ( AT2G27030.1 )
(BLAST)

001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK

Arabidopsis Description

CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.