Factsheet for VIT_05s0049g01220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	VIT_06s0009g01910.t01	AT2G41090.1	17360592
AT3G23310.1	VIT_08s0040g00470.t01	AT2G41090.1	17360592
AT3G23310.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT3G23310.1	VIT_06s0009g01910.t01	AT5G21274.1	17360592
AT3G23310.1	VIT_08s0040g00470.t01	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31692	Soybean	cytosol	86.0	86.47
KRG92406	Soybean	cytosol	84.91	86.0
KRH34395	Soybean	nucleus	84.73	85.66
Solyc09g090200.2.1	Tomato	nucleus	82.73	83.18
CDY12763	Canola	cytosol	81.82	81.67
AT4G14350.4	Thale cress	cytosol	81.45	81.31
CDY49415	Canola	cytosol	81.45	81.31
Bra010763.1-P	Field mustard	cytosol	80.73	80.73
VIT_07s0005g03690.t01	Wine grape	cytosol	80.18	80.47
CDX85087	Canola	cytosol	80.36	80.22
CDX77529	Canola	cytosol	80.18	80.04
Bra014937.1-P	Field mustard	cytosol	80.18	80.04
KRH69089	Soybean	cytosol	80.36	79.07
AT3G23310.1	Thale cress	cytosol	80.55	77.99
VIT_10s0003g05720.t01	Wine grape	cytosol	77.64	75.71
CDX90255	Canola	cytosol	80.73	70.36
CDY12061	Canola	cytosol	77.09	66.56
VIT_04s0008g01400.t01	Wine grape	cytosol	60.55	66.2
VIT_11s0016g01800.t01	Wine grape	cytosol	56.91	62.85
VIT_18s0001g10470.t01	Wine grape	cytosol	56.36	59.05
CDY09005	Canola	cytosol	46.36	54.37
Bra033489.1-P	Field mustard	nucleus	77.09	41.94
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	24.0	29.2
VIT_08s0058g01440.t01	Wine grape	cytosol	25.82	29.04
VIT_13s0074g00100.t01	Wine grape	cytosol	24.18	26.28
VIT_16s0022g01240.t01	Wine grape	cytosol	34.0	15.78
VIT_18s0001g12260.t01	Wine grape	cytosol	30.0	14.88
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	32.91	13.86

Protein Annotations

EntrezGene:100252887	wikigene:100252887	MapMan:18.4.6.4	InterPro:AGC-kinase_C	EMBL:AM473649	ProteinID:CAN61876
ProteinID:CAN61876.1	ProteinID:CBI23658	ProteinID:CBI23658.3	ncoils:Coil	UniProt:D7SZI1	EMBL:FN595496
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR000961	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252887	wikigene:LOC100252887	PFAM:PF00069	PFAM:PF00433
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF208
InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TIGR:TC61284	UniParc:UPI00015C7522	ArrayExpress:VIT_05s0049g01220	EnsemblPlantsGene:VIT_05s0049g01220	EnsemblPlants:VIT_05s0049g01220.t01
unigene:Vvi.9651	RefSeq:XP_002285280	RefSeq:XP_002285280.1	RefSeq:XP_010650104.1	RefSeq:XP_019075525.1	RefSeq:XP_019075526.1

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:D7SZI1]

Coordinates

chr5:+:8340132..8359048

Molecular Weight (calculated)

63283.6 Da

IEP (calculated)

7.798

GRAVY (calculated)

-0.771

Length

550 amino acids

Sequence
(BLAST)

001: MKSIGCWFNK LKSRDKAKSS KKEATNNGKE GSKAVTSEEA PSNVTKQKVA AAKQYIENHY KEQMKNLQER KERRNILEKK LADAEVSEEE QNNLLKHLEK
101: KETEYMRLQR HKMGADDFEP LTMIGKGAFG EVRVCREKKT GHVYAMKKLK KSEMLRRGQV EHVKAERNLL AEVDSNCIVK LYCSFQDEEF LYLVMEYLPG
201: GDMMTLLMRK DTLTEDEARF YVGETVLAIE SIHKHNYIHR DIKPDNLLLD RYGHMKLSDF GLCKPLDCSN LHEKDFSLGN NLSGALQSDG RPAAPRRTQQ
301: EQLQHWQRNR RMLAYSTVGT PDYIAPEVLL KKGYGMECDW WSLGAIMYEM LVGYPPFYSD EPMTTCRKIV NWRTHLKFPE EAKLSPEAKD LISKLLCNVD
401: QRLGTKGADE IKAHPWFEGV DWDKLYQIEA AFIPEVNDEL DTQNFEKFEE ADDQIQTSSK AGPWRKMLSS KDINFVGYTY KNFEIVNDQP VPGIAELKKK
501: STKTKRPSIK SLFDDESGAA ANEPVQGSFL NLLPPKLEVS QKHGDPHRPH

Best Arabidopsis Sequence Match ( AT4G14350.4 )
(BLAST)

001: METAKAWLSK LKSKDKVKSS KKKEATSNVK EGPKTAGGEE ALSNITKEKA AAAKLYIENH YKMQMQSLQE RKERRKMLEK KLAAAEVSEE EQNNLLKDLE
101: MKETEYMRRQ RHKMGADDFE PLTMIGKGAF GEVRICREKG TGNVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YLYLIMEYLP
201: GGDMMTLLMR KDTLTEDEAR FYIGETVLAI ESIHKHNYIH RDIKPDNLLL DKDGHMKLSD FGLCKPLDCS NLQEKDFTVA RNVSGALQSD GRPVATRRTQ
301: QEQLLNWQRN RRMLAYSTVG TPDYIAPEVL LKKGYGMECD WWSLGAIMYE MLVGFPPFYS DDPMTTCRKI VNWRNYLKFP DEVRLSPEAK DLICRLLCNV
401: EQRLGTKGAD EIKGHPWFRG TEWGKLYQMK AAFIPQVNDE LDTQNFEKFE ETDKQVPKSA KSGPWRKMLS SKDINFVGYT YKNVEIVNDD QIPGIAELKK
501: KSNKPKRPSI KSLFEDETSG GTTTHQGSFL NLLPTQIEDP EKEGSKSSSS G

Arabidopsis Description

AGC (CAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L7S7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.