Factsheet for VIT_18s0001g10470.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05680	Soybean	cytosol	82.1	82.1
KRH15363	Soybean	cytosol	81.33	81.64
Solyc12g088820.1.1	Tomato	cytosol	77.33	81.53
PGSC0003DMT400039856	Potato	cytosol	77.33	81.2
PGSC0003DMT400020578	Potato	cytosol	80.57	80.27
Solyc04g078870.2.1	Tomato	cytosol	80.19	79.73
AT5G09890.2	Thale cress	cytosol	76.0	77.33
Bra040471.1-P	Field mustard	cytosol	60.0	77.21
Bra031468.1-P	Field mustard	cytosol	76.57	76.86
CDY46196	Canola	cytosol	76.19	76.78
CDY03775	Canola	cytosol	76.0	76.58
CDY56408	Canola	cytosol	76.57	75.99
VIT_04s0008g01400.t01	Wine grape	cytosol	58.86	61.43
VIT_11s0016g01800.t01	Wine grape	cytosol	55.62	58.63
VIT_05s0049g01220.t01	Wine grape	cytosol	59.05	56.36
VIT_07s0005g03690.t01	Wine grape	cytosol	57.71	55.29
VIT_10s0003g05720.t01	Wine grape	cytosol	57.71	53.72
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	25.9	30.09
VIT_08s0058g01440.t01	Wine grape	cytosol	25.71	27.61
VIT_13s0074g00100.t01	Wine grape	cytosol	24.76	25.69
VIT_18s0001g12260.t01	Wine grape	cytosol	29.33	13.89
VIT_16s0022g01240.t01	Wine grape	cytosol	30.29	13.42
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	31.05	12.48

Protein Annotations

EntrezGene:100257460	wikigene:100257460	MapMan:18.4.6.4	InterPro:AGC-kinase_C	ProteinID:CBI19515	ProteinID:CBI19515.3
ncoils:Coil	UniProt:E0CPV2	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257460
wikigene:LOC100257460	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF195	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TIGR:TC61829	UniParc:UPI000198546F
ArrayExpress:VIT_18s0001g10470	EnsemblPlantsGene:VIT_18s0001g10470	EnsemblPlants:VIT_18s0001g10470.t01	unigene:Vvi.10955	RefSeq:XP_002284758	RefSeq:XP_002284758.1
SEG:seg	:	:	:	:	:

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:E0CPV2]

Coordinates

chr18:+:8790336..8809443

Molecular Weight (calculated)

60268.0 Da

IEP (calculated)

5.876

GRAVY (calculated)

-0.548

Length

525 amino acids

Sequence
(BLAST)

001: MDGADGTVKF GPLNMKADPY LDCAQDVAVS SPVTRQKAAA AKQFIENHYK NYLQGLQDRK ERRRALQRRA QEAQVSNEEQ EQMLRSLERK ETEYMRLQRH
101: KIRIDDFEQL TIIGKGAFGE VRLCRGKSTG EIFAMKKLKK SEMLSRGQVE HVRSERNLLA EVDSRCIVKL FYSFQDSDFL YLIMEYLPGG DIMTLLMRED
201: VLSEDVARFY IAESILAIHS IHQHSYVHRD IKPDNLILDK NGHLKLSDFG LCKPLDDKYS TILLENDVFN TQESTSETEG YSGYDRAPWS MPKERLQQWK
301: RNRRALAYST VGTLDYMAPE VLLKKGYGME CDWWSLGAIM YEMLIGYPPF CSDDPRITCR KIINWKTCLK LPEEPKISDE AKDLICHLLC DVETRLGTGG
401: VEEIKAHPWF RCIQWDKLYE MEAAHKPTVT GELDTQNFEK FDEVEGPPST IPRVGPWRKM LTSKDANFIG YTFKKSDIMK SIGTSGTDVR SNGSSKAPSL
501: VSLFGQIDLQ ETATEDEEKE DALVF

Best Arabidopsis Sequence Match ( AT5G09890.1 )
(BLAST)

001: MDGADGTVRV KPGRGFETET DVAVSSPVTR QKAAAAKQFI ENHYKNYLQG LHERMERRRE FQRKVQEAQL PVEEQDEMMR NLARRETEYM RLQRRKIGID
101: DFELLTVIGK GAFGEVRLCR LRSTSEVYAM KKLKKTEMLS RGQVEHVRSE RNLLAEVDSR YIVKLFYSFQ DSECLYLIME YLPGGDIMTL LMREDILSED
201: VARFYIAESI LAIHSIHQHN YVHRDIKPDN LILDKSGHLK LSDFGLCKPL DDKYSSLLLE DDEMLSQDSE NQSGKSDADK APWQMPKEQL LQWKRNRRAL
301: AYSTVGTLDY MAPEVLLKKG YGMECDWWSL GAILYEMLVG YPPFCSDDPR ITCRKIINWR VCLKFPEEPK ISDEARDLIC RLLCDVDSRL GTRGVEEIKS
401: HPWFKGTPWD KLYDMEAAYR PIVDGELDTQ NFEKFPEVEG SPSEAPQVGP WRKMLTSKDT NFIGFTFKKS DITRSMESSG ADMKSNGSGE APSLISLLGR
501: INMEEGEGGE LNHKT

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KFD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.