Factsheet for VIT_04s0008g01400.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61550	Soybean	cytosol	84.89	84.89
KRH52224	Soybean	cytosol	84.49	84.49
GSMUA_Achr7P08900_001	Banana	cytosol	81.71	82.2
Solyc08g062670.2.1	Tomato	cytosol	83.7	80.96
GSMUA_Achr6P04850_001	Banana	cytosol	77.93	80.82
Zm00001d051049_P001	Maize	cytosol	19.09	79.34
Bra011411.1-P	Field mustard	cytosol	79.32	76.88
AT4G33080.1	Thale cress	cytosol	79.13	76.69
CDX68937	Canola	cytosol	79.13	76.69
VIT_11s0016g01800.t01	Wine grape	cytosol	74.35	75.1
CDX75322	Canola	endoplasmic reticulum	76.54	74.18
HORVU3Hr1G020020.4	Barley	cytosol	77.14	72.25
TraesCS3B01G129500.1	Wheat	cytosol	77.14	72.12
Os01t0186700-01	Rice	cytosol	77.93	72.06
TraesCS3D01G112400.1	Wheat	cytosol	77.14	71.99
TraesCS3A01G110400.1	Wheat	cytosol	77.34	71.77
EES00154	Sorghum	cytosol	78.33	71.77
HORVU1Hr1G027770.1	Barley	cytosol	75.15	71.73
HORVU1Hr1G030190.4	Barley	plasma membrane	59.24	70.62
KXG21484	Sorghum	cytosol	76.14	70.15
TraesCS1B01G140900.4	Wheat	cytosol	74.95	69.94
TraesCS1A01G121700.4	Wheat	cytosol	74.95	69.94
TraesCS1D01G122500.4	Wheat	cytosol	74.75	69.76
Zm00001d008791_P001	Maize	cytosol	78.33	69.73
Zm00001d039526_P002	Maize	cytosol	73.96	64.14
Zm00001d009940_P005	Maize	cytosol	75.75	63.61
VIT_05s0049g01220.t01	Wine grape	cytosol	66.2	60.55
VIT_10s0003g05720.t01	Wine grape	cytosol	67.0	59.75
VIT_18s0001g10470.t01	Wine grape	cytosol	61.43	58.86
VIT_07s0005g03690.t01	Wine grape	cytosol	63.62	58.39
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	26.24	29.2
VIT_08s0058g01440.t01	Wine grape	cytosol	26.44	27.2
VIT_13s0074g00100.t01	Wine grape	cytosol	25.45	25.3
VIT_18s0001g12260.t01	Wine grape	cytosol	30.42	13.8
VIT_16s0022g01240.t01	Wine grape	cytosol	31.61	13.42
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	32.6	12.56

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252504	wikigene:100252504	MapMan:18.4.6.4	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
ProteinID:CCB46579	ProteinID:CCB46579.1	UniProt:F6H3P6	EMBL:FN595231	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100252504	wikigene:LOC100252504	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109554	ArrayExpress:VIT_04s0008g01400	EnsemblPlantsGene:VIT_04s0008g01400
EnsemblPlants:VIT_04s0008g01400.t01	unigene:Vvi.19117	RefSeq:XP_002280119	RefSeq:XP_002280119.2	SEG:seg	:

Description

No Description!

Coordinates

chr4:+:1147969..1166249

Molecular Weight (calculated)

58036.6 Da

IEP (calculated)

5.962

GRAVY (calculated)

-0.586

Length

503 amino acids

Sequence
(BLAST)

001: MEEGSGEEEV LGSSLTMEKV AAAKQFIENH YRTQMKTIQE RKERRWVLER RLASSDVPKE EQINLIKDLE RKETEFMRLK RHKICVDDFE LLTIIGRGAF
101: GEVRLCREKK SENIYAMKKL KKSEMLIRGQ VEHVRAERNL LAEVASHCIV KLYYSFQDAE YLYLIMEYLP GGDMMTLLMR EDTLSESVAK FYIAQSVLAI
201: ESIHKHNYIH RDIKPDNLLL DKNGHMKLSD FGLCKPLDCR TLSALKEDEV MDDENSRESM DIDGGFPDAD NRSSWKSPRE QLQHWQMNRR KLAFSTVGTP
301: DYIAPEVLLK KGYGMECDWW SLGAIMYEML VGYPPFYSDD PMTTCRKIVH WKNHLKFPED PKLTAEAKDL IYRLLCDVEH RLGTGGVGQI KAHPWFKDVV
401: WDKLYEMEAA FKPEVNGELD TRNFMKFDEL DPPTQARSGS GPSRKMLLTP KDLSFVGYTY KNFDALKGLR PSSGDARADY TARETADDTD VQMLAPSGDP
501: MSP

Best Arabidopsis Sequence Match ( AT4G33080.2 )
(BLAST)

001: MEDIQEEENG TDEEVLGSSL TMEKVAAAKQ YIENHYKAQN KNIQERKERR WILERKLASS GVPKEEQINM IKDLERKETE FMRLKRNKIS VDDFELLTII
101: GRGAFGEVRL CRERKSGNIY AMKKLKKSEM VMRGQVEHVR AERNLLAEVE SHYIVKLYYS FQDPEYLYLI MEYLPGGDMM TLLMREDTLR EDVARFYIAQ
201: SVLAIESIHR YNYIHRDIKP DNLLLDKDGH MKLSDFGLCK PLDCRNLPSI QENRATDDET MSEPMDVDRC FPDTDNKRSW RSPQEQLQHW QMNRRKLAFS
301: TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGYPP FYADDPISTC RKIVHWRNHL KFPEDAKFSS EAKDLICRLL CNVDHRLGTG GGAQQIKDHP
401: WFKDVVWEKL YEMEAAYKPE VNDELDTQNF MKFDEVNSPA PERTRSGLSR KMLLAPKDLS FVGYTYKNFD AVKGLRHSLA EAMPVELISG EAAEAQMVSS
501: MDDPMII

Arabidopsis Description

AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GUH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.