Factsheet for VIT_18s0001g12260.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013171	Potato	cytosol	53.29	62.47
Solyc04g080170.2.1	Tomato	cytosol	60.6	62.05
CDY17064	Canola	cytosol	57.89	60.74
Bra014042.1-P	Field mustard	cytosol	57.71	60.55
CDY43221	Canola	cytosol	57.62	60.4
AT1G45160.2	Thale cress	cytosol	56.9	59.14
VIT_16s0022g01240.t01	Wine grape	cytosol	41.21	38.57
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	45.0	38.21
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	12.71	31.19
VIT_08s0058g01440.t01	Wine grape	cytosol	13.71	31.08
VIT_04s0008g01400.t01	Wine grape	cytosol	13.8	30.42
VIT_11s0016g01800.t01	Wine grape	cytosol	13.62	30.32
VIT_05s0049g01220.t01	Wine grape	cytosol	14.88	30.0
VIT_07s0005g03690.t01	Wine grape	cytosol	14.61	29.56
VIT_18s0001g10470.t01	Wine grape	cytosol	13.89	29.33
VIT_10s0003g05720.t01	Wine grape	cytosol	14.7	28.9
VIT_13s0074g00100.t01	Wine grape	cytosol	11.9	26.09

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259179	wikigene:100259179	MapMan:18.4.6.1	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
ProteinID:CCB45935	ProteinID:CCB45935.1	UniProt:F6H1H6	EMBL:FN595227	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100259179	wikigene:LOC100259179	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285
PANTHER:PTHR24356	PANTHER:PTHR24356:SF155	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002108CAE	ArrayExpress:VIT_18s0001g12260	EnsemblPlantsGene:VIT_18s0001g12260	EnsemblPlants:VIT_18s0001g12260.t01	unigene:Vvi.22934	RefSeq:XP_002282958
RefSeq:XP_002282958.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:10446283..10469785

Molecular Weight (calculated)

124213.0 Da

IEP (calculated)

5.667

GRAVY (calculated)

-0.499

Length

1109 amino acids

Sequence
(BLAST)

0001: MAEPIRSGGD ISTEIGIPTG LNRIKTRRES SKDQLNWKPD DDDKFHESRP RGISRPPANQ KHNKGHAKFA GSIEGFHKGK KIARWFTSHL SKDSSQGFDD
0101: VPPKVQDSNS KVKAPDKEGS TRTKQWKEGK HLTGKQSSPE GLSSIKVPKG LKSFSHELGP KGGIPPSHPR AHSYNDLKEL LGSLHSRFDA AKEVVNVELS
0201: SLTGDIMDAL QRNDSSPGQK MAEGLLILAQ QCMEMTPSEF RIKCETIVQG LTEKRQHCQT AFLKWLFTRM LFILTRCTRL LRFQKDSEPI DEKSLHNFTK
0301: CLESIPAVEM NWAPYSRIVD SGSDYDSNGK SDAKHELQWR NRVSSLLEQT WCRSEEPADK SGITSRKDSM VLVQKPLSQN SQIDFLPHIE QDGDYPGKSM
0401: NSFEDGSLHE PERGLDGSDS VICRICEENV PTSHLESHSY ICAYADKCDL KYLDIDERLS KLAEILEQII ESRNLNFQAS FCSPENSRMQ ITNSAVISEG
0501: CSPKISEWRN KGVEGMFEDL HEMDTACIDD SYLTNPLNLK GHWGTKLSQY GAPSSTGSMT SMSSTNTPRA GHFDLFWLEH NNPSKLEDVQ QMADLADIAR
0601: CVAGTDLSKE GSCDFLLACM EDLQDVLQNT KLKSLVIDTF GGRIENLLRE KYILACELAD TKSPKSDNRI KESSRLLFDN ASHSSTMSTP LHPLHKERTS
0701: IDDFEIIKPI SRGAFGKVFL ARKRTTGDLF AIKVLKKLDM IRKNDIERIL AERNILITVR NPFVVRFFYS FTCRDNVYLV MEYLNGGDLY SLLRKLGCLE
0801: EDVARIYIAE LVLALEYLHS LGIVHRDLKP DNILIAHDGH IKLTDFGLSK IGLINSTVDL SGPETDGSTD AFLDSLNLHT QQTDDRHRQS AVGTPDYLAP
0901: EILLGTEHGY AADWWSVGII LFELITGVPP FTAEHPEIIF DNILNRKIPW PSVPGDMSYE AQDLINRFLI HDPDLRLGAN GLSEVKTHPF FKGVNWDTLA
1001: LQKAVFVPQP DSADDTSYFV SRYSQIPSGL PDEQDCSDSA TDSSDLYSNS GLEMDECGDL AEFDSSPLNL SLINFSFKNL SQLASINYDV LLQTGKDPTK
1101: CSPSKSRDT

Best Arabidopsis Sequence Match ( AT1G45160.2 )
(BLAST)

0001: MAEENRKDRG VSSTVAIPSG LNRIKTRLAS SGPRPEDSSD TVLKPPFNRN QKTIVPRGHG RTTGSSKQER KGTKLSRWLA SYKPKYSCHP PKYACSSTTS
0101: SEEIKLRGKN SGKDEEKMIK ISETNPPCSK SMGIKSFSHE LGPRGGVQTP YPRPHSYNDL KELLGSLHSR FDVAKETVDK KLDVFVRDVK EAMEKMDPSC
0201: PEDREMAEQL LDVARACMEM TSAQLRATCE SIVQDLTRKR KQCQAGLVKW LFSQLLFILT HCTRVVMFQK ETEPIDESSF RKFKECLERI PALETDWGST
0301: PRVDDSGSGY PEYQRNEAGQ KFKRRDKESL ESETALDYVV PNDHGNNAAR EGYAAAKQEF PSHEPQFDSK VVEQRFYLSD EYEDKMSNEP GKELGGSDYV
0401: ICRICEEEVP LFHLEPHSYI CAYADKCEIN CVDVDERLLK LEEILEQIID SRSLNSFTQA GGLENSVLRK SGVASEGCSP KINEWRNKGL EGMFEDLHEM
0501: DTAFIDESYT YPIHLKSHVG AKFCHHATSS STGSITSVSS TNTPRTSHFD SYWLERHCPE QEDLRLMMDL SDIARCGAST DFSKEGSCDY IMACMQDIQA
0601: VLKQGKLKAL VIDTFGGRIE KLLCEKYLHA RELTADKSSV GNIKESEDVL EHASATPQLL LKDRISIDDF EIIKPISRGA FGKVFLARKR TTGDFFAIKV
0701: LKKLDMIRKN DIERILQERN ILITVRYPFL VRFFYSFTCR DNLYLVMEYL NGGDLYSLLQ KVGCLDEEIA RIYIAELVLA LEYLHSLKIV HRDLKPDNLL
0801: IAYNGHIKLT DFGLSKIGLI NNTIDLSGHE SDVSPRTNSH HFQKNQEEER IRHSAVGTPD YLAPEILLGT EHGYAADWWS AGIVLFELLT GIPPFTASRP
0901: EKIFDNILNG KMPWPDVPGE MSYEAQDLIN RLLVHEPEKR LGANGAAEVK SHPFFQGVDW ENLALQKAAF VPQPESINDT SYFVSRFSES SCSDTETGNN
1001: SGSNPDSGDE LDECTNLEKF DSPPYYLSLI NFSFKNLSQL ASINHDVLLQ KDPAKGGGDS PFKSHGT

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HPN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.