Factsheet for VIT_16s0022g01240.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.58	73.42
CDY30714	Canola	cytosol	30.21	70.2
GSMUA_Achr1P16890_001	Banana	cytosol	16.03	68.59
KRH23792	Soybean	cytosol	58.14	68.22
KRH40003	Soybean	cytosol, plastid	67.68	67.68
Solyc03g083590.2.1	Tomato	cytosol	64.98	65.98
CDX86906	Canola	cytosol	61.01	64.61
AT5G62310.1	Thale cress	cytosol	63.46	64.38
CDY00276	Canola	cytosol	60.76	64.34
Bra010074.1-P	Field mustard	cytosol	60.42	63.64
Os12t0621500-01	Rice	plasma membrane	48.44	56.22
TraesCS5B01G025000.1	Wheat	cytosol	48.27	55.7
TraesCS5D01G033500.1	Wheat	cytosol	48.1	55.5
TraesCS5A01G025700.1	Wheat	cytosol	48.02	55.4
GSMUA_Achr1P16880_001	Banana	cytosol	34.09	54.3
Zm00001d041269_P010	Maize	cytosol	46.58	51.83
EES16404	Sorghum	cytosol	47.85	51.78
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	55.78	50.61
GSMUA_Achr8P32250_001	Banana	mitochondrion	46.92	49.6
VIT_18s0001g12260.t01	Wine grape	cytosol	38.57	41.21
VIT_05s0049g01220.t01	Wine grape	cytosol	15.78	34.0
VIT_07s0005g03690.t01	Wine grape	cytosol	15.53	33.58
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	12.57	32.96
VIT_11s0016g01800.t01	Wine grape	cytosol	13.42	31.93
VIT_08s0058g01440.t01	Wine grape	cytosol	13.16	31.9
VIT_10s0003g05720.t01	Wine grape	cytosol	15.11	31.74
VIT_04s0008g01400.t01	Wine grape	cytosol	13.42	31.61
VIT_18s0001g10470.t01	Wine grape	cytosol	13.42	30.29
VIT_13s0074g00100.t01	Wine grape	cytosol	11.39	26.68

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100252544	wikigene:100252544	MapMan:18.4.6.1	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
ProteinID:CCB49293	ProteinID:CCB49293.1	UniProt:F6HAR9	EMBL:FN595506	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009826	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	GO:GO:0040007	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100252544
wikigene:LOC100252544	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356
PANTHER:PTHR24356:SF155	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002108A2E
ArrayExpress:VIT_16s0022g01240	EnsemblPlantsGene:VIT_16s0022g01240	EnsemblPlants:VIT_16s0022g01240.t01	RefSeq:XP_002265664	RefSeq:XP_002265664.2	SEG:seg

Description

No Description!

Coordinates

chr16:-:13169033..13189943

Molecular Weight (calculated)

132518.0 Da

IEP (calculated)

5.479

GRAVY (calculated)

-0.497

Length

1185 amino acids

Sequence
(BLAST)

0001: MHDPPPPAVD SSPTAAPSAS LKAKLRKIPP IPVRRNPRDD SVDDKEEEGD GESENDDVSD DDSEFILASS LGLNQIRTRS SPSPLRFTSL AGEPPNLGND
0101: AKKNKDGAEA RPKRTSPLCR ATSMEHSQGK KISWIQPKSF RVPSPLNPGL EAHHAILAKE IQSPRFQAIL RVTSGRRKRT SDIKSFSHEL NSKGVRAFPF
0201: WKSRAVGHME EIMVVIRAKF DRLKEEVNSD LGIFAGDLVG ILEKTAETKL EWKEGLEDLL IVARHCAKMP PNEFWLKCEG IVQNLDDRRQ ELPMGTLKQA
0301: HTRLLFILTR CTRLVQFHKE SGYEEDHILG LHQLSDLGIY SEHILGAMQQ ESGGPVDVNE KQSKKSHAQE HSSLAPKQDQ VDHDLDSGVE DHEVGTAKSA
0401: DSITSSYKMS SWKKYPSTAE KNHRKGNEAV DMTSKVKLDP LPVKDENKTG INDNTGNMVT PSCLSENAEA TSKVHRVSWG CWSDQQQITY ENSMICRICE
0501: VEIPTVHVED HSRICTIADR CDLKGLTVNE RLERVAETLE RILECWTPKS TDTSGGSPDI VRVSISSASE ELDDFSPKKN TLSRSCSTDM LDCVNEADNE
0601: FVMDDLNVLP EMSCDTRSFL TTDQGTRASS SGSLTPRSPL LTPRTNQIEL LLSGRRAISE HENFQQISKL LDIARSVVTV NSNDYSALEY MLDRLEDLKY
0701: AIQYRKVDAL IVQTFGRRIE KLLQEKYVHL CGQIEDEKID SSNTMADEDS PVEDDAVRSL RASPINPSCK DRTSIEDFEI LKPISRGAFG RVFLARKRAT
0801: GDLFAIKVLK KADMIRKNAV ESILAERNIL ISARNPFVVR FFYSFTCREN LYLVMEYLNG GDLYSLLKNL GCLDEDMARA YIAEVVLALE YLHSLNVIHR
0901: DLKPDNLLIG HDGHIKLTDF GLSKVGLINS TEDLSGPSVL LGHDEPNTTV QKPLKREQRQ KHSVAGTPDY LAPEILLGMG HGTTADWWSV GVILFELLVG
1001: IPPFNAANPQ KIFDNIMNRD IPWPKVPEEM SFEAHDLIEK LLIENPFQRL GATGASEVKK HVFFKGINWD TFARQKAMFI PSAESAYDTS YFMSRYIWNP
1101: EDEHVHGESD CEDTTETCSG TCSSGSFSNG DECGNLADFS APNLAVNYSF SNFSFKNLSQ LASINYDLLV KTFKDSPETS RSSNP

Best Arabidopsis Sequence Match ( AT5G62310.1 )
(BLAST)

0001: MSTTEPSPEN DRDPQPTTIS TPTSTNAKLL KKIPAIPFRH SDKEGEDEQA KTDEVTTELA GEGPMSHDSP EILAPSSLGL NHIRTKSSPA PSPLRFSSAT
0101: PLISPGQDDK DVAKEKPRVG VVDARADARA RWPIPPHQPD QGKKVQWSQS KSQRVPANSN PGVESTHVGL AKETQSPRFQ AILRVTSGRK KKAHDIKSFS
0201: HELNSKGVRP FPVWRSRAVG HMEEIMAAIR TKFDKQKEDV DADLGVFAGY LVTTLESTPE SNKELRVGLE DLLVEARQCA TMPASEFWLK CEGIVQKLDD
0301: KRQELPMGGL KQAHNRLLFI LTRCNRLVQF RKESGYVEEH ILGMHQLSDL GVYPEQMVEI SRQQDLLREK EIQKINEKQN LAGKQDDQNS NSGADGVEVN
0401: TARSTDSTSS NFRMSSWKKL PSAAEKNRSL NNTPKAKGES KIQPKVYGDE NAENLHSPSG QPASADRSAL WGFWADHQCV TYDNSMICRI CEVEIPVVHV
0501: EEHSRICTIA DRCDLKGINV NLRLERVAES LEKILESWTP KSSVTPRAVA DSARLSNSSR QEDLDEISQR CSDDMLDCVP RSQNTFSLDE LNILNEMSMT
0601: NGTKDSSAGS LTPPSPATPR NSQVDLLLSG RKTISELENY QQINKLLDIA RSVANVNVCG YSSLDFMIEQ LDELKYVIQD RKADALVVET FGRRIEKLLQ
0701: EKYIELCGLI DDEKVDSSNA MPDEESSADE DTVRSLRASP LNPRAKDRTS IEDFEIIKPI SRGAFGRVFL AKKRATGDLF AIKVLKKADM IRKNAVESIL
0801: AERNILISVR NPFVVRFFYS FTCRENLYLV MEYLNGGDLF SLLRNLGCLD EDMARIYIAE VVLALEYLHS VNIIHRDLKP DNLLINQDGH IKLTDFGLSK
0901: VGLINSTDDL SGESSLGNSG FFAEDGSKAQ HSQGKDSRKK HAVVGTPDYL APEILLGMGH GKTADWWSVG VILFEVLVGI PPFNAETPQQ IFENIINRDI
1001: PWPNVPEEIS YEAHDLINKL LTENPVQRLG ATGAGEVKQH HFFKDINWDT LARQKAMFVP SAEPQDTSYF MSRYIWNPED ENVHGGSDFD DLTDTCSSSS
1101: FNTQEEDGDE CGSLAEFGNG PNLAVKYSFS NFSFKNLSQL ASINYDLVLK NAKESVEASN QSAPRPET

Arabidopsis Description

IREProbable serine/threonine protein kinase IRE [Source:UniProtKB/Swiss-Prot;Acc:Q9LE81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.