Factsheet for VIT_17s0000g07520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 5
cytosol 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56989	Soybean	cytosol	46.9	79.1
KRH03389	Soybean	plastid	67.92	73.98
PGSC0003DMT400083117	Potato	cytosol, plastid	71.24	69.1
Solyc06g071210.2.1	Tomato	nucleus	70.8	68.67
VIT_08s0058g01440.t01	Wine grape	cytosol	58.19	53.78
VIT_04s0008g01400.t01	Wine grape	cytosol	29.2	26.24
VIT_18s0001g10470.t01	Wine grape	cytosol	30.09	25.9
VIT_11s0016g01800.t01	Wine grape	cytosol	27.65	25.1
VIT_07s0005g03690.t01	Wine grape	cytosol	29.65	24.45
VIT_05s0049g01220.t01	Wine grape	cytosol	29.2	24.0
VIT_13s0074g00100.t01	Wine grape	cytosol	26.33	23.52
VIT_10s0003g05720.t01	Wine grape	cytosol	28.76	23.05
VIT_18s0001g12260.t01	Wine grape	cytosol	31.19	12.71
VIT_16s0022g01240.t01	Wine grape	cytosol	32.96	12.57
VIT_17s0000g02000.t01	Wine grape	cytosol, plastid	32.52	11.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100244943	wikigene:100244943	MapMan:18.4.6.3	MapMan:27.7.2.1	Gene3D:3.30.200.20
InterPro:AGC-kinase_C	EMBL:AM484806	ProteinID:CAN77683	ProteinID:CAN77683.1	ProteinID:CCB43020	ProteinID:CCB43020.1
UniProt:F6GSX9	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100244943
wikigene:LOC100244943	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24351	PANTHER:PTHR24351:SF116	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001985154	ArrayExpress:VIT_17s0000g07520
EnsemblPlantsGene:VIT_17s0000g07520	EnsemblPlants:VIT_17s0000g07520.t01	unigene:Vvi.22621	RefSeq:XP_002280523	RefSeq:XP_002280523.1	SEG:seg

Description

Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:F6GSX9]

Coordinates

chr17:-:8459251..8463969

Molecular Weight (calculated)

50060.9 Da

IEP (calculated)

8.022

GRAVY (calculated)

-0.411

Length

452 amino acids

Sequence
(BLAST)

001: MIPSTPHKKT LHSILASKLK LTIPSPSSPD SLDFSDVFGP LTPHHHKASP SSSSPSSSSP CVALGDPQVI HNRSHSLLGP SPRFAVTAPL LPFKEDMVFQ
101: SEGSDKEGGD EVGEGRVGPG DFEIMRVVGK GAFGKVFQVR KKGGPEISGD SDGIFAMKVM RKDTIISKNH MDYMKAERDI LIKVEHPFIV SLRCSFQTNS
201: KLYLIMDFVN GGHLFFHLYR QGIFSEDQAR VYIAEIVSAV SHLHKSGIVH RDLKPENILM DADGHVMLTD FGLAKEIDES SRSNSMCGTT EYMAPEILLS
301: KGHNKDADWW SIGILLYEML TGQPPFTHAN RQKLQQRIIK EKVKLPSYLS SEAHSLLKGL LQKEPSRRLG SGPTGGDEIQ NHKWFRSINW KKLEARELQP
401: KFKPDVSGKD CTANFDQCWT AMPLDDSPAP TPTAGGHFQG YTYVAPNPWL SS

Best Arabidopsis Sequence Match ( AT3G08720.1 )
(BLAST)

001: MVSSQCSVAN KNQTGKPFQK HLSLSISPPK SVLGDNLELQ FSDVFGPMPE ANSEEACDVA YDEPAVVYSR SHSLVGPSLV VSHSLKMNKL TLRETEDSVD
101: LVECVEGESI KENDEFSGND DTDSEKSPEE VSGVVGIEDF EVLKVVGQGA FGKVYQVRKK DTSEIYAMKV MRKDKIVEKN HAEYMKAERD ILTKIDHPFI
201: VQLKYSFQTK YRLYLVLDFI NGGHLFFQLY HQGLFREDLA RVYTAEIVSA VSHLHEKGIM HRDLKPENIL MDVDGHVMLT DFGLAKEFEE NTRSNSMCGT
301: TEYMAPEIVR GKGHDKAADW WSVGILLYEM LTGKPPFLGS KGKIQQKIVK DKIKLPQFLS NEAHALLKGL LQKEPERRLG SGPSGAEEIK KHKWFKAINW
401: KKLEAREVQP SFKPAVSGRQ CIANFDKCWT DMSVLDSPAS SPNSDAKANP FTNFTYVRPP HSFLHRTTSN L

Arabidopsis Description

ATPK2Serine/threonine-protein kinase AtPK2/AtPK19 [Source:UniProtKB/Swiss-Prot;Acc:Q39030]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.