Factsheet for PGSC0003DMT400083117

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071210.2.1	Tomato	nucleus	98.07	98.07
KRH56989	Soybean	cytosol	44.21	76.87
KRH03389	Soybean	plastid	64.81	72.77
VIT_17s0000g07520.t01	Wine grape	cytosol, plastid	69.1	71.24
PGSC0003DMT400080233	Potato	cytosol, plastid	53.65	52.63
PGSC0003DMT400059084	Potato	cytosol	51.72	51.83
PGSC0003DMT400039856	Potato	cytosol	29.61	27.6
PGSC0003DMT400000873	Potato	cytosol	29.18	26.77
PGSC0003DMT400065573	Potato	cytosol	28.97	26.32
PGSC0003DMT400020578	Potato	cytosol	29.4	26.0
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.6	25.95
PGSC0003DMT400043552	Potato	cytosol	23.18	22.55
PGSC0003DMT400070360	Potato	cytosol	23.18	22.31
PGSC0003DMT400013171	Potato	cytosol	23.39	11.52
PGSC0003DMT400074066	Potato	nucleus, plastid	3.65	2.19
PGSC0003DMT400074067	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102595020	MapMan:18.4.6.3	MapMan:27.7.2.1	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR000961
InterPro:Kinase-like_dom_sf	UniProt:M1D6I8	PFAM:PF00069	PFAM:PF00433	EnsemblPlantsGene:PGSC0003DMG400033060	PGSC:PGSC0003DMG400033060
EnsemblPlants:PGSC0003DMT400083117	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351
PANTHER:PTHR24351:SF116	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294BB33	RefSeq:XP_006354810.1	SEG:seg	:

Description

Ribosomal-protein S6 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400033060]

Coordinates

chr6:+:52065669..52069687

Molecular Weight (calculated)

51987.8 Da

IEP (calculated)

7.376

GRAVY (calculated)

-0.512

Length

466 amino acids

Sequence
(BLAST)

001: MAFAAQQKKA IHSMLANKLT HLKIPDSSSS SPPSTDPDFD FSDVFGAPTS SSSPSSSSSF LTDPQIIHSR SHSFVGPSPR ITLSKPLPFH QEVDSESESD
101: SDKVNTHVGT HQTECTDGVE EISGDEGLAV TKFGPGDFEI LRMIGKGSFG KVFQVKMKGY GGEGDGILAM KVMRKDTVIK NKHVDYMRAE RDILTKVEHP
201: FIVQLRYSFQ TKSKLYLILD FINGGHLFYH LYRQGIFSED QARIYAAEIV SAVSHLHQRG IVHRDLKPEN ILMDGDGHVM LTDFGLAKEI DESSRSNSMC
301: GTMEYMAPEI IQSKGHNKDA DWWSVGVLLY EMLTGQPPFT HANRKKLQEK IISEKLKLLP RLTGEAHSLL KGLLQKDPSK RLGSGPRGGD EIKSHKWFRT
401: INWKKLDARE LQPKFKPDVI GRDCTANFDK CWTTMPPDDS PASTPTTGEH FQGYTYVAPN PWLSSS

Best Arabidopsis Sequence Match ( AT3G08720.1 )
(BLAST)

001: MVSSQCSVAN KNQTGKPFQK HLSLSISPPK SVLGDNLELQ FSDVFGPMPE ANSEEACDVA YDEPAVVYSR SHSLVGPSLV VSHSLKMNKL TLRETEDSVD
101: LVECVEGESI KENDEFSGND DTDSEKSPEE VSGVVGIEDF EVLKVVGQGA FGKVYQVRKK DTSEIYAMKV MRKDKIVEKN HAEYMKAERD ILTKIDHPFI
201: VQLKYSFQTK YRLYLVLDFI NGGHLFFQLY HQGLFREDLA RVYTAEIVSA VSHLHEKGIM HRDLKPENIL MDVDGHVMLT DFGLAKEFEE NTRSNSMCGT
301: TEYMAPEIVR GKGHDKAADW WSVGILLYEM LTGKPPFLGS KGKIQQKIVK DKIKLPQFLS NEAHALLKGL LQKEPERRLG SGPSGAEEIK KHKWFKAINW
401: KKLEAREVQP SFKPAVSGRQ CIANFDKCWT DMSVLDSPAS SPNSDAKANP FTNFTYVRPP HSFLHRTTSN L

Arabidopsis Description

ATPK2Serine/threonine-protein kinase AtPK2/AtPK19 [Source:UniProtKB/Swiss-Prot;Acc:Q39030]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.