Factsheet for PGSC0003DMT400080233

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g074930.1.1	Tomato	cytosol, plastid	96.42	96.42
VIT_08s0058g01440.t01	Wine grape	cytosol	72.84	70.76
CDY58648	Canola	cytosol	62.95	70.52
KRH40713	Soybean	cytosol	69.89	69.31
KRH00425	Soybean	cytosol	69.89	69.31
GSMUA_Achr5P27890_001	Banana	cytosol	66.53	69.15
CDY58649	Canola	cytosol	66.53	69.0
Bra040057.1-P	Field mustard	cytosol	66.74	68.91
Bra029712.1-P	Field mustard	cytosol	65.47	68.81
Os07t0680900-01	Rice	extracellular	60.63	68.74
CDY36000	Canola	cytosol	65.26	68.58
CDY22167	Canola	cytosol	66.32	68.48
CDY27983	Canola	cytosol	65.26	68.13
AT3G08720.2	Thale cress	cytosol, plastid	67.37	67.94
Bra029713.1-P	Field mustard	cytosol	65.89	67.9
CDY27982	Canola	cytosol, mitochondrion	65.68	67.83
CDY36001	Canola	cytosol, mitochondrion	65.89	67.75
AT3G08730.2	Thale cress	cytosol, mitochondrion	66.32	67.74
CDY22166	Canola	cytosol	62.95	67.49
Bra040056.1-P	Field mustard	cytosol	57.26	66.83
Os03t0334000-02	Rice	cytosol	66.32	65.62
Zm00001d029050_P002	Maize	cytosol	65.89	65.07
Zm00001d047531_P001	Maize	cytosol, plastid	65.68	64.86
PGSC0003DMT400059084	Potato	cytosol	63.16	64.52
KXG39433	Sorghum	cytosol	65.89	64.4
TraesCS4D01G172700.1	Wheat	plastid	65.05	64.24
TraesCS4B01G170700.1	Wheat	cytosol	65.05	64.24
TraesCS2B01G121500.1	Wheat	cytosol	64.84	63.37
TraesCS4A01G134300.2	Wheat	cytosol	64.84	63.24
HORVU2Hr1G017630.2	Barley	cytosol	64.63	63.17
TraesCS2D01G104200.1	Wheat	cytosol	64.63	63.17
TraesCS2A01G104500.1	Wheat	cytosol	64.63	63.17
HORVU4Hr1G050660.6	Barley	cytosol	65.05	63.06
EER97738	Sorghum	cytosol	63.58	62.14
Zm00001d022434_P001	Maize	cytosol	63.58	62.14
PGSC0003DMT400083117	Potato	cytosol, plastid	52.63	53.65
PGSC0003DMT400059233	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.32	27.53
PGSC0003DMT400039856	Potato	cytosol	27.37	26.0
PGSC0003DMT400065573	Potato	cytosol	27.58	25.54
PGSC0003DMT400000873	Potato	cytosol	26.74	25.0
PGSC0003DMT400020578	Potato	cytosol	27.58	24.86
PGSC0003DMT400070360	Potato	cytosol	24.21	23.76
PGSC0003DMT400043552	Potato	cytosol	23.37	23.17
PGSC0003DMT400013171	Potato	cytosol	26.11	13.11
PGSC0003DMT400074067	Potato	cytosol	0.84	6.9
PGSC0003DMT400074066	Potato	nucleus, plastid	3.37	2.06

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591740	MapMan:18.4.6.3	MapMan:27.7.2.1	Gene3D:3.30.200.20	InterPro:AGC-kinase_C
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR000961	InterPro:Kinase-like_dom_sf	UniProt:M1D360	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400031230	PGSC:PGSC0003DMG400031230
EnsemblPlants:PGSC0003DMT400080233	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24351
PANTHER:PTHR24351:SF116	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002962605	RefSeq:XP_006362339.1	:	:	:

Description

Ribosomal protein S6 kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400031230]

Coordinates

chr10:-:48733807..48738685

Molecular Weight (calculated)

53486.4 Da

IEP (calculated)

7.066

GRAVY (calculated)

-0.327

Length

475 amino acids

Sequence
(BLAST)

001: MVSSQLFAPT KTNLQKSFHR QLLLPLSAPG LIPSEQVELD FSDVFGPPPC LASNETSNGM SEGVVFPADM SELVYDDPEI VHSRSHSLVG PSSYKNQILK
101: LGRLTIHEAE DSLELVENVI EQTIKEDQEL SVNDSAKGGT VCLEDFEVMK VVGQGAFGKV FQVKKKGTSD IYAMKVMRKD KIMEKNHAEY MKAERDILTK
201: IDHPFVVQLR YSFQTKYRLY LVLDFINGGH LFFQLYKQGL FREDLGRIYA AEIISAVSHL HANGIMHRDL KPENILVDVD GHAMLTDFGL AKEFKEDTRS
301: NSMCGTVEYM SPEIVLGKGH DKAADWWSVG ILLFEMLTGK PPFTGNRQKI QQKIVKDKFK MPAFLSSEAH SLLKGLLQKD PTKRLGSGLK GSDEIKDHKW
401: FKPINWKKLE AREMRPSFRP EIAGTHCIAN FDKCWTDMSL VDSPISSPKD NSDPFQGYTF ARPAASFLLR SSPLC

Best Arabidopsis Sequence Match ( AT3G08720.1 )
(BLAST)

001: MVSSQCSVAN KNQTGKPFQK HLSLSISPPK SVLGDNLELQ FSDVFGPMPE ANSEEACDVA YDEPAVVYSR SHSLVGPSLV VSHSLKMNKL TLRETEDSVD
101: LVECVEGESI KENDEFSGND DTDSEKSPEE VSGVVGIEDF EVLKVVGQGA FGKVYQVRKK DTSEIYAMKV MRKDKIVEKN HAEYMKAERD ILTKIDHPFI
201: VQLKYSFQTK YRLYLVLDFI NGGHLFFQLY HQGLFREDLA RVYTAEIVSA VSHLHEKGIM HRDLKPENIL MDVDGHVMLT DFGLAKEFEE NTRSNSMCGT
301: TEYMAPEIVR GKGHDKAADW WSVGILLYEM LTGKPPFLGS KGKIQQKIVK DKIKLPQFLS NEAHALLKGL LQKEPERRLG SGPSGAEEIK KHKWFKAINW
401: KKLEAREVQP SFKPAVSGRQ CIANFDKCWT DMSVLDSPAS SPNSDAKANP FTNFTYVRPP HSFLHRTTSN L

Arabidopsis Description

ATPK2Serine/threonine-protein kinase AtPK2/AtPK19 [Source:UniProtKB/Swiss-Prot;Acc:Q39030]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.